Sander lucioperca (pikeperch): 116061907
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Entry
116061907 CDS
T07345
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain
KO
K06752
MHC class II antigen
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04145
Phagosome
sluc04514
Cell adhesion molecules
sluc04672
Intestinal immune network for IgA production
sluc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116061907
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116061907
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
116061907
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116061907
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sluc04147
]
116061907
Exosome [BR:
sluc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116061907
Exosomal proteins of epithelial cells
116061907
Exosomal proteins of breast milk
116061907
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
C2-set_2
C2-set_3
Ig_3
DUF2527
Motif
Other DBs
NCBI-GeneID:
116061907
NCBI-ProteinID:
XP_031172140
Ensembl:
ENSSLUG00000005019
UniProt:
A0A8C9XMG1
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All DBs
Position
17:567439..570813
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AA seq
249 aa
AA seq
DB search
MASSFLRVSLLFISLYTADGFRSYVLTHCDFNSSDLKDIEFIRSYYYNKLEIVRFSSSLG
KFVGYTELGVKNAERFNKDPSILAQQRAEKERYCKHNIDVEYRAALTKSAEPYVRLSSTA
PSGGKHSAMLVCSVYDFYPKQIRVKWTRDGQEVTSDVTSTDELADGDWYYQIHSHLEYTP
RSGEKISCMVEHASLREPLITDWDPSMPESERNKIAIGASGLILGLVLSLAGFIYYKRKA
RGRILVPSS
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatcctttctcagagtctccctgctcttcatcagcctctacacagcagatgga
tttcgaagttatgttctgacccattgtgactttaactcgtctgatctgaaggacatcgag
ttcatcaggtcttattattacaacaagttggagatcgtcaggttcagcagcagtttgggg
aagtttgttggatacactgagctgggagtgaagaacgcagaacgcttcaacaaagatcct
tcaatactggctcagcagagagctgagaaggagagatactgcaaacacaacattgatgtt
gagtaccgtgctgctctgactaaatcagctgagccctatgtcagactgagctctacggcg
ccctctggtggtaaacattcagccatgttggtctgcagcgtctacgacttctaccccaaa
cagatcagagtgaagtggaccagagacggacaggaagtcacctctgatgtcacttccact
gatgagctggcagacggtgattggtactaccagatccactctcacctggagtacacgccc
aggtctggagagaagatctcctgtatggtggaacacgccagcctgagagaacctctgatt
actgattgggacccgtccatgcctgagtctgagaggaacaagattgccatcggagcctca
ggactgatcctgggtctggtcttatctctggctggattcatctactacaagaggaaggcc
cgaggacggattctggttcccagtagctga
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