Sander lucioperca (pikeperch): 116062368
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Entry
116062368 CDS
T07345
Name
(RefSeq) platelet-derived growth factor receptor beta-like
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04010
MAPK signaling pathway
sluc04020
Calcium signaling pathway
sluc04510
Focal adhesion
sluc04540
Gap junction
sluc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116062368
04020 Calcium signaling pathway
116062368
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116062368
04540 Gap junction
116062368
09142 Cell motility
04810 Regulation of actin cytoskeleton
116062368
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sluc01001
]
116062368
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sluc04090
]
116062368
Enzymes [BR:
sluc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
116062368
Protein kinases [BR:
sluc01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
116062368
CD molecules [BR:
sluc04090
]
Proteins
116062368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
VEGFR-1-like_Ig-like
C2-set_2
RIFIN
APH
Haspin_kinase
DUF6232
Stevor
Motif
Other DBs
NCBI-GeneID:
116062368
NCBI-ProteinID:
XP_031172891
Ensembl:
ENSSLUG00000010692
UniProt:
A0A8C9YCX2
LinkDB
All DBs
Position
13:25793481..25830982
Genome browser
AA seq
1040 aa
AA seq
DB search
MMGSTRGPTGSLKVLHFLLGLFLVEGLELLPSSREVLLNSNSNFTVVCSGWSPVTWRLPT
DSQVDGVAVETQGSSSVLQLVNATWRNSGRYTCEEAWANQSRDIDIFIPGRGPEEWFVPL
GPGVVMKEAEEDTIPCVVSDPRLNVSLYQRPGMTPVTTTTYEPGRGFTGRLNDTSYICSA
AGAAGEAESQVYYVFSVVVPKMMEVDLTVSGSVLKQGEVLTVNCTVKDAEMVFFSWDFPR
RQEVEPLTDFLPNQIRSFVNISTATVADSGVYVCEVKETMQGQTVKKNVTVTVLERGFVY
AWPSGDTNASCLLHHTVALSLEVHAHPAPTVLWTRDNHTVATETSSVTTAHLTGSRYVST
LTLVRVRMNQTGSYTATVSNDDDEEEVVFNLEVKAPPRITSLSEVSSTAMLCVSEGAPPP
SVTWYTCHSSHRCANVTAGWRSLSAASEGVALQENVTQVEERGISQVSSVLTLQSLSSVS
AVRCEAKNSAGRRARDLRVLSNSLLSQVMVLAAVMVLVVIAVIFLIILILLWRKKPRYEV
LWKVIESVSADGQQYYLDPTALPYNSAWEVPRDNVVLGQVLGSGAFGRVVAATVSGLLHS
HSTTKVAVKMVKPSSGADQSLMSELKVLVHLGPHLNVVNLLGACTRGGPVYLITEFCRHG
DLVGYLNRNKHTFLQTDAKAHSDGDGGYMDMNKEESVQYVAMKELSYADIEPAVYETPYT
PPDHQEASSLLSDSLLLSLNDLLSFSFQISQAMDFLSSRNCVHRDLAARNVLVCEGKLVK
ICDFGLARDVMKDQDYIARGNSFLPVKWMSPESIFQNIYSSQSDVWSYGVLLWEIFSLGG
SPYPDLPMTQQFYSSLKRGYRMSRPDHAPNDIYDLMKQCWEEKPQSRPSFSSLSVAVGNM
MTDDYRKRYLQLSQDFLKGDNPAVVRSSGCPIRERTDDADGSPAPQVNVHLLEAEPEEAG
PSHVSYIIPVTDITIETSGNAALDAVSPQLSESPGEQEVTSSEDGQKVTSSEDTQEVISS
EDGQEVTSPKKRPKEEESCL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgatggggtccaccagaggaccaactgggagtctgaaggtgctgcacttccttctgggt
ctgttcctggttgaaggtctggagctgcttccttcctcgcgtgaagttctgctcaactca
aactccaacttcactgtggtgtgttcagggtggagtcctgtgacttggcggttgccgacg
gactcccaggtggacggtgttgccgtggagacccaggggtccagcagcgtcctgcagctc
gttaacgccacctggaggaactctgggagatacacctgtgaggaggcgtgggccaatcag
agcagagacatcgacatcttcatacctggtcgagggccggaggaatggttcgtcccgctg
ggtccaggtgtggtgatgaaggaggcggaggaagacaccatcccgtgtgtggtatccgac
ccgcggctcaacgtctcgctgtaccaacgtcccggcatgacgccggttaccacgacgacg
tacgagccgggacgcggattcacgggccgtctgaacgacacgtcgtacatctgctcggcc
gccggcgccgctggggaggcggagtcacaggtgtactacgtgttcagcgtcgtagtccct
aagatgatggaggtggatctgaccgtgtccggctccgtgttgaagcagggcgaggtcctc
acggtcaactgcaccgtcaaagacgccgagatggtcttcttctcctgggacttcccccgc
agacaggaggtggagcctctgaccgactttctgcccaatcagatccgctccttcgttaac
atctccacggcaacggtggcagattctggtgtgtatgtgtgtgaggtgaaggagacgatg
cagggacagacggtgaagaaaaacgtcacggtgacggttctggagcgtggcttcgtctac
gcctggccttcaggagacaccaatgcgtcgtgtctcctccaccacacggtggcactcagc
ttggaagtccacgcccaccccgcccccaccgtcctctggaccagagacaaccacaccgtc
gccacggaaacctcctccgtcaccacggcacacctgacaggaagcaggtatgtgagcact
ctgacgctggttcgagtccggatgaatcagacaggaagttatacagccaccgtttccaac
gacgacgacgaggaagaggtcgtcttcaacttggaggtcaaagccccccctaggatcacg
tctctgtccgaggtcagcagtacggcgatgctgtgtgtcagcgagggagctccgccccct
tcggtcacctggtacacctgtcacagctcccacaggtgcgctaacgtgacggcgggctgg
aggagcctatcggcagcctcggagggtgtggctctgcaggagaatgtcacacaggtggag
gagagaggcatctcccaggtgagcagcgtgttgactctgcagagtctaagctctgtgtca
gctgttcgctgtgaagccaaaaactcagcaggacggcgagccagagacctgagagtcctg
tccaactctctcctgtctcaggtgatggtgttagcagcagtgatggttctggttgtcatc
gccgtcatcttcctcatcatcctcatcctcctctggagaaaaaaacctcggtatgaagta
ctctggaaggtgattgagtcggtgagcgctgatggacagcagtactacctcgaccccacc
gccctgccatacaactctgcctgggaagtaccgcgggacaacgtagtactaggtcaggtg
ttgggttcaggtgcttttggtcgtgttgtcgcggcaaccgtctctggtctgcttcactct
cactctacaactaaagtggccgtcaagatggtcaaacccagcagtggtgccgatcagtct
ctgatgtctgaattgaaggttctggttcatctcggccctcacctgaatgtcgtcaatctg
ctgggagcgtgcacgagaggaggtcctgtctatctgatcacagagttttgtcgtcatgga
gacctggtgggctacctgaacaggaacaaacacaccttcctgcagactgacgcaaaggca
cacagtgacggtgatggaggttatatggacatgaataaagaggagagcgttcagtatgtc
gccatgaaggagctcagctacgccgacatcgaacctgcggtctacgagacgccgtacacg
cccccagaccaccaggaggcgtcgtctctcctcagtgactctctcctcctcagcctcaac
gaccttctcagtttctccttccagatctctcaggccatggacttcctctcctccagaaat
tgcgtccacagagacctggcagcgaggaacgtcctggtctgcgaggggaagctggtgaag
atctgtgactttggtttggcccgagatgtgatgaaggaccaggactacatcgccagagga
aacagcttcctgccggtgaagtggatgtctcctgagagtattttccagaacatttacagc
tctcagagtgacgtgtggtcctatggagtcttactgtgggagatcttctctctggggggg
agcccgtaccctgaccttcccatgactcagcagttttactcgtctctgaagagaggatac
aggatgagtcgccctgatcacgctccgaacgacatttatgatctgatgaaacagtgttgg
gaggagaaacctcagtccagaccatctttctcctcgctgagcgtcgccgtgggcaacatg
atgaccgacgactacagaaagcgttacctccagctgagccaggacttcctgaaaggtgat
aatccagctgtggtgcggtccagtggctgtccaatcagagagcggacggacgacgcagac
ggaagtcccgccccccaggtgaacgttcacctgctggaggcggagccagaggaggcaggc
ccctcccacgtcagttacatcatccccgtcactgacatcaccatagaaaccagcggcaac
gctgcgctggacgcagtcagccctcagctctcagagtctccaggagaacaggaagtgaca
tcatcagaggatggacagaaagtaacatcatcagaggatacacaggaagtgatatcatct
gaggacggacaggaagtgacatcaccaaagaagcgtcctaaggaagaggagagctgcctg
tga
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