Sander lucioperca (pikeperch): 116062395
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Entry
116062395 CDS
T07345
Symbol
nr1h4
Name
(RefSeq) bile acid receptor isoform X1
KO
K08537
farnesoid X receptor
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116062395 (nr1h4)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sluc03310
]
116062395 (nr1h4)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116062395 (nr1h4)
Nuclear receptors [BR:
sluc03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
116062395 (nr1h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Put_Phosphatase
Motif
Other DBs
NCBI-GeneID:
116062395
NCBI-ProteinID:
XP_031172936
Ensembl:
ENSSLUG00000025380
LinkDB
All DBs
Position
7:16345208..16365749
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AA seq
490 aa
AA seq
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MNEWCPDINVVGPIPPSDEFSISESSHLFDILADQGSPLLQDPDILPFTSYPSMQYPCIE
PTMSSTPYYSSQNYYPQYNGDEWYSHTGIYELRKGPLEVSFDAEMEDVSAVVPAVCKRTR
HMSQAGRVKGEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYKCKSGGNCEMDM
YMRRKCQECRLRKCKEMGMLAELKPSSPLAGLLTEIQCKSKRLRKNTKASPGQSTGDETE
GADNTDNKQVTSTTKLSKEKVEITKEQQALVKSIVDAYNRHQIPQDMTKKLLQEQYSAEE
NFLLLTEMATSQVQVLVEFTKNIPGFLSLDCEDQIALLKGSAVEAMFLRSAQVLSKRMPN
GYTEVLKERVRNSGMSEEFMTPMFNFYKSIDELQMVQEEQALLTAVTILTPDRPYVKDYQ
AVERLQETMLVVLRKLCVLQHPQDPQYFARLLGRLTELRTLNHYHAEMLTSWRMNDQKFT
PLLCELWDVQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtggtgccccgacatcaatgtggtgggaccaatcccacccagcgatgaattc
tccatctcagagagctcccacttgtttgatattctggcagatcaaggaagtcctctcctg
caggatcccgacatcttacccttcaccagctatcccagcatgcaatacccatgcatagag
ccgaccatgtcttctacaccatactactccagtcagaactactacccacagtacaatgga
gatgaatggtattcacacacggggatatatgaactgaggaaaggaccgctggaggtcagc
tttgatgctgagatggaggatgtgtctgctgtggtgcctgctgtgtgcaagaggacccgg
cacatgtcgcaggctggaagggtcaaaggggaggaactgtgtgtggtgtgtggagacaag
gcctctggataccactataacgctcttacctgtgagggatgtaaaggttttttcagacgg
agcataaccaagaacgctgtgtacaaatgcaagagtggcggaaactgtgagatggacatg
tacatgcgccggaaatgccaggagtgtcggctaagaaagtgcaaggagatgggcatgctg
gccgaattgaagccttcatcaccactggcaggcctgctgacagagatccagtgtaagtct
aaaaggctgcggaagaacaccaaggcctccccgggacagtcgactggagacgagacagag
ggggcggacaacacagacaacaaacaggtcacctcaaccaccaaactgtcaaaggaaaaa
gttgaaatcaccaaagagcagcaggcgctcgtgaaatccatcgtagatgcttacaacaga
catcaaattcctcaagacatgaccaaaaagctgctccaagaacagtacagcgcagaggaa
aacttcctcctattgacagaaatggcaacaagtcaagttcaagttctggtggagtttaca
aaaaatattccaggctttctctctctggattgtgaggatcagatcgctctgctgaaaggt
tcggctgtggaggccatgtttctacgctcagctcaggttctcagcaaaagaatgcccaac
ggatacacagaagttttaaaggagagggtacgcaatagtggtatgtcagaggaattcatg
acacccatgttcaacttttacaaaagcatcgatgaactccaaatggtgcaggaggaacag
gctcttctaactgccgtaaccatcctgacaccagatcggccttacgtgaaggattatcaa
gctgtggagagacttcaggagaccatgctggtcgtgctgaggaagctgtgtgtcctgcaa
cacccacaggacccacagtactttgctcgtctcctgggccgtctgacggagctgagaaca
ctcaaccactaccacgcagagatgctaacatcctggagaatgaacgaccaaaaatttaca
ccgttgctctgtgagctctgggatgtgcagtga
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