Sander lucioperca (pikeperch): 116063537
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Entry
116063537 CDS
T07345
Symbol
scn4ab
Name
(RefSeq) sodium channel protein type 4 subunit alpha B isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sluc04040
]
116063537 (scn4ab)
Ion channels [BR:
sluc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
116063537 (scn4ab)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
116063537
NCBI-ProteinID:
XP_031174391
Ensembl:
ENSSLUG00000004948
LinkDB
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Position
21:20271925..20325666
Genome browser
AA seq
1808 aa
AA seq
DB search
MALVLPPVGSEIFKRFTPASLEEIQQRQEVEEKERQRRKEKNIEIAEEDLPKPASDLEAG
KPLPFIYGDLPPELFNTPLEELDPFYQSQKTFIVIGKGNMIYRFNAEPACYLLSPFSRIR
TVAIKILIHSLFSMFIMVTIITNCAFMTMSDPPAWSKAVEYVFTFIYTFEATIKVVSRGF
CVGGFTFLKDPWNWLDFMVISMAYLTEFIDLGNVSVLRTFRVLRALKTITVIPGLKTIVG
ALIQSVKKLADVMILTVFCLCVFALIGLQLFMGNLRQKCVLIPPPLLSNHTSDIDLDTGY
HGNDTHSNRTGSGDFDYNEYINNPENFYFLPGQLDALLCGNSSDAGVCPEGYVCLKAGRN
PNYGYTSYDSFGWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINL
ILAVVAMAYAEQNEANIAEAKQKEEEYAQILELLKKRQEEQAACRAELLEKEDSSADTNK
HEQEHTAMEGKHTKTIKTMKTLYHMTPAGSHSQSKTEFYTPNKVITSVGIRRCVNKTDMT
NLLCVSEFADDQRPCPPCWYAFADIFLKWNCCGCWRWLKPWLYTIVMDPFVDLGITICIV
LNTVFMAMEHYPMTEEFEELLSIGNLVFTGIFTAEMVLKLLAMDPYYYFQVGWNIFDSII
VTMSLVELGLANVEGLSVLRSFRLMRVFKLAKSWPTLNMLIRIIGKSVGALGNLTLVLAI
IVFIFAVVGMQLFGKNYKDCVCRISLDCMHPRWHMIDFFHAFLIIFRVLCGEWIETMWDC
MEVAGPTMCLIVFMMVMVIGNMVVLNLFLALLLSSFSGDNLAAPEEEGENNLQIAINRIN
MAVAWTKTWILQQIWTLTGKKNHLDPEHTAAAHGEEDDMTTKDCLVLTAVTLDQQGSEVK
SLDCNHGNNHDVGRLRVPIAEAESDFETPDNDEDEEDEVDEENEEKLSKCDGSSVCSTVQ
KLPDIQEGEDDEDDPNTPVDCYSDDWYRRCPFLDVDTSQGRGKVWSNIRRTCFCIVEHNY
FESFIIFMILMSSGALAFEDIYLEQRRVIKMVLEYADQVFTYVFVVEMVLKWVAYGFKTY
FTNAWCWLDFLIVDVSLVSLTANILGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNA
LVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYHCFNETSEEMFLPEDVNNRSECFAL
IEANISGVRWKNVKVNYDNVGMGYLSLLQVATFKGWMDIMYAAVDSRDVESQPMYEANLY
MYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKSKLGGKDIFMTEEQKKYYNAMKKLGSKK
PQKPVPRPENKFQALVFDLVTTQVFDIFIMVLICLNMVTMMVETDEQSEDKVLILYWINL
VFIVIFTGECTLKIAALRQHYFSVGWNIFDFVVVILSIVGLLLADIIEKYFVSPTLFRVI
RLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVRKE
AMIDDMFNFETFGNSMICLFTITTSAGWDGLLSPIMNTPPDCDPDLENPGSAVRGDCGSP
GIGIVFFTTYIIMSFLVVVNMYIAIILENFNVATEESSDPLCEDDFEMFYETWEKFDPDA
SQFIQYSKLSDFCDTLKDPLRISKPNTVKLIHMDLPLVPGDKIHCLDILLALTAQVLGDA
GGMDALKASMEEKFMANNPSKVSYEPISSTLRRKQEDVAASVIQRAYRKHLLQRTLKLAS
YKYRAKMDERGEAPPETEGLLCQRISRLYGDEPVPGPVKLQRESILHTAPPLNAANFLQD
ENLRESVV
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgtactaccccctgttggttcagagatcttcaaacgcttcacgccagcctcg
ctggaggaaatccaacaacgacaggaagtggaggagaaggagcgccagaggaggaaggag
aagaacatcgagattgcagaggaagatcttcctaaaccagccagtgatctcgaagctggg
aagcccctcccattcatctatggagacctgccccctgagcttttcaacaccccactggag
gagctggatcccttctaccaatcacagaagacgttcatcgtgattggtaaaggaaacatg
atctaccgttttaacgccgagccagcctgttacctgctgagtccattcagtcggataagg
accgtcgctatcaagatcctcatccactctttattcagtatgttcatcatggtgacgatt
atcaccaactgtgcgttcatgacgatgagtgatcctccagcatggagcaaagccgttgag
tatgtttttactttcatctacacgtttgaagcaacgatcaaagttgtgtcgagaggattc
tgtgtcggtgggttcaccttcctcaaagacccctggaactggctggacttcatggtcatc
agcatggcatacttgacagagtttatagatttgggaaatgtttctgtgctgaggacgttc
agagttcttcgagctctgaagaccatcacagtcatcccaggtctgaagacgattgtcgga
gctctgatccaatcggtgaagaagctggctgatgtcatgattctgaccgtgttctgcctc
tgcgtcttcgctctaattggtctgcagctcttcatggggaacctgcggcaaaaatgtgtc
ctgataccaccaccgttgcttagcaaccacacatctgacattgacctcgacaccggttac
catggcaatgacacccacagcaacaggacaggaagcggtgactttgattacaacgagtac
atcaacaacccagagaacttctacttcctgcctggtcaactggatgctctgctgtgtggg
aacagctcggacgccggggtctgtccagagggttacgtctgtctgaaggcggggagaaac
ccaaactacggctacaccagctacgactcgtttggttgggcgtttctggctctgttcaga
ctgatgacccaggacttctgggaaaacctcttccagctgacactgcgagcagcaggtaaa
acctacatgatcttctttgtggtcatcatcttcctcggctcgttctacctcattaacctc
atcctggccgtggttgccatggcttacgctgagcagaacgaggccaacatagccgaggcc
aaacagaaggaggaagagtacgctcagatcctggagctgctgaagaagagacaggaggag
caggcagcctgcagagcggagctcttagaaaaagaggattcatctgcagacacaaacaaa
cacgagcaagaacatactgccatggaaggtaaacacacaaagacaataaagacaatgaag
acattatatcacatgacacccgcaggttctcacagccaatcaaaaactgagttttacaca
ccgaacaaagtgataacttctgttgggattcggcgctgtgtaaataaaactgacatgact
aacctgctgtgtgtttcagagtttgctgatgaccagaggccgtgtcctccatgttggtac
gccttcgctgacatcttcctgaagtggaactgctgcggctgttggcggtggctcaaaccg
tggctctacaccattgttatggacccattcgttgacctcggcatcaccatctgcatcgtc
ctaaacaccgtcttcatggccatggagcattatccaatgacagaggagttcgaggagctc
ctgagcatcggaaatctggtcttcacggggatcttcacagctgagatggtcctcaaactt
ctggccatggacccatactactacttccaggtgggctggaacatcttcgacagcatcatc
gtcaccatgagtctggtggagctcggactggcaaacgtcgagggcctgtcggtgctgcgc
tccttcagactgatgcgagtgtttaagctggccaagtcgtggccgaccctcaacatgctg
ataaggatcattgggaagtcggtgggcgctctggggaacctgacgctggtgctggccatc
atcgtcttcatcttcgccgtggttggcatgcagctgtttgggaagaactacaaagactgc
gtctgccgtatctcgctcgactgcatgcacccccgctggcacatgatcgacttcttccac
gccttcctcatcatcttcagagtgctgtgtggggagtggatcgagaccatgtgggactgc
atggaggtcgccggcccaaccatgtgtctgatcgtctttatgatggtcatggtcatcggg
aacatggtggtcttgaatctgttcctggccttgttgctgagctcatttagtggagataat
cttgcggctccagaagaagaaggagaaaacaacctgcagatcgccataaaccggatcaac
atggccgtggcttggaccaagacctggatcctccaacaaatctggactttaacgggaaag
aagaaccacttggacccagaacacaccgcagcggcccatggtgaggaagacgacatgaca
acaaaggattgtttggttttgaccgctgtgaccttagatcagcaggggtcagaggttaag
tccctcgactgtaaccatggcaacaaccacgacgttggccgtctgagggtccccatcgcc
gaggctgagtcagactttgagacaccggacaacgatgaagatgaagaggacgaagtggac
gaagaaaatgaagaaaaactctccaaatgtgatgggtcatcagtctgcagcaccgtacag
aaacttcctgacattcaggagggcgaagacgatgaagatgatccaaacacacctgtggac
tgctacagtgacgactggtaccgccgctgtccattcctggacgtagacacgtcccagggc
agagggaaggtctggtctaacatcaggagaacctgtttctgcattgtagaacacaactac
tttgagagcttcatcattttcatgatcctgatgagcagtggagcgctggcgtttgaggac
atctacctggagcagcgccgcgttataaagatggttctagagtacgcagaccaggtgttc
acctatgtgttcgtggtggagatggttctgaagtgggtcgcctatgggttcaagacatac
ttcaccaacgcctggtgctggctcgacttcctcatcgtagacgtgtctctggtgtcactg
acagcaaacatcctgggatactctgagctaggagcaatcaagtctctgaggacgctgaga
gctctgaggcccctgagggccctgtctcgctttgagggaatgagggtggtggtgaatgcg
ctggtcggagcaatcccgtccatcttcaacgtgctgctagtgtgtctgatattctggctg
atcttcagcatcatgggagtgaatctgtttgcaggaaagttttatcactgtttcaatgag
acgtctgaggagatgtttctccctgaagacgtcaacaacaggagcgagtgttttgctctg
atcgaggcaaacatcagcggggttcgctggaagaacgtaaaggtcaactacgacaacgtg
gggatgggctacctgtcgctgctgcaggtggccacgtttaaaggctggatggacatcatg
tacgcagcagtggactccagagacgtggagtcccagccgatgtacgaggccaatctctac
atgtacatttactttgtcatcttcatcatctttggttccttcttcactctcaacctcttc
atcggagttatcatcgacaacttcaaccagcagaaatcaaagttgggaggaaaagatatt
ttcatgacggaggagcagaagaaatattacaacgccatgaagaaactgggctccaagaaa
cctcagaaacctgttccacgacctgagaataagttccaggctctggtgttcgacctggtg
accacgcaggtgtttgatatcttcatcatggtgttgatctgtctcaacatggtgacaatg
atggtggagacagacgagcagagtgaggacaaagtcttgatcctgtactggatcaacctg
gtcttcatcgtcatcttcaccggagagtgcacgctgaagattgcggcgctccgccagcac
tacttctccgtcggctggaacatcttcgacttcgtggtcgtcatcctgtcaatcgtaggc
ctgctcctcgctgacatcatagagaagtattttgtctcgcccacgctcttccgtgtgatc
cgactggctcgtatcggccgggtccttcgtctcatccgtggagccaaggggatccggaca
ctgctgtttgccctgatgatgtcacttcctgcgctcttcaacatcggcctgctactcttc
ctcatcatgttcatcttctccatcttcggcatgtccaacttcgcctacgtgcgtaaggag
gcgatgatcgacgacatgtttaacttcgagacgtttgggaacagcatgatctgtcttttt
acgatcaccacgtcggccggctgggacgggctgctgagccccatcatgaacacgccgcca
gactgcgaccccgacctggagaacccaggctccgcggtgcggggcgactgcggcagcccg
gggattggtatcgtcttctttaccacctacatcatcatgtccttcctcgtggtggtcaac
atgtacatcgccatcatcctggagaacttcaacgtggcgacggaggagagcagcgacccg
ctgtgcgaggatgactttgagatgttttatgaaacctgggagaagttcgaccccgacgct
tcacagttcatccagtacagtaaactgtcagatttctgtgacactctgaaggatcctctg
aggatttccaaaccgaacacagtcaaactgatccacatggatctgccgctggttcctgga
gacaaaatccactgtctggacatcctgctggctctcaccgcccaggtgttaggtgatgcc
ggagggatggatgctcttaaagcaagcatggaggagaagttcatggccaacaacccctcc
aaggtgtcgtatgaaccaatcagcagcacgctgcggaggaaacaggaagatgtcgcggca
tcagtgatccagagagcatacaggaaacacctgctgcagcggacgctcaaactggcgtcc
tacaaatacagagcgaagatggacgaacggggagaggcaccgcccgagaccgaaggactg
ctctgccagcgaatcagccggctgtacggagacgagccggtgcccggcccagtgaagctt
cagagagagtccatcctccacactgctcctccgctaaacgccgcaaacttcctccaagat
gagaacctgagggagtcagtcgtctga
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integrated database retrieval system
