Sander lucioperca (pikeperch): 116064307
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Entry
116064307 CDS
T07345
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04010
MAPK signaling pathway
sluc04020
Calcium signaling pathway
sluc04510
Focal adhesion
sluc04540
Gap junction
sluc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116064307 (pdgfrb)
04020 Calcium signaling pathway
116064307 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116064307 (pdgfrb)
04540 Gap junction
116064307 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
116064307 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sluc01001
]
116064307 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sluc04090
]
116064307 (pdgfrb)
Enzymes [BR:
sluc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
116064307 (pdgfrb)
Protein kinases [BR:
sluc01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
116064307 (pdgfrb)
CD molecules [BR:
sluc04090
]
Proteins
116064307 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Adeno_E3_CR1
VEGFR1-3_N_Ig-like
RIFIN
Ig_VEGFR-1-like_5th
VEGFR-1-like_Ig-like
C2-set_3
Haspin_kinase
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
116064307
NCBI-ProteinID:
XP_031175276
Ensembl:
ENSSLUG00000012684
UniProt:
A0A8C9YNZ5
LinkDB
All DBs
Position
1:34911020..34938097
Genome browser
AA seq
1101 aa
AA seq
DB search
MRRVTASTLHLTVTVTALLYFCTELCCLEITPDDKELVLAEGSSLSLTCSGSGDTTWVFK
RDDVPYFQVEFQNGGQSYQVVQSSITSSVLTLWNVSWKHTGVYQCVDQHTGETKEVAVFV
PDPDVWFIESSHGMVTKTSEESTVPCVVTNPNINVTLYERDTDLPIRGLYVPSEGYKARL
EDRTYVCRGELNEEVKESQAFYVFSIVVPEAIDAYINASKTVLKQGEPLTVNCTVHGVEL
VFFSWDIPNREVVAVEPLTDVLSAMSMRSYLIFPHATVAHSGNYVCHVHEHVLDQTASAS
VNITVLEQGFVDVKAPQQQNISAKLQENVELRVEIEAYPPPQVRWSKDGATIKRDKTITT
RQEHEIRYVTTLTLVRVRTEQKGLYTVLVTNEDDTKEVTFDLEVQVPSQIKELTDNHLPG
KRHLVTCVAEGVPTPTIQWYSCDSMHKCSNQTAAWQPLIPEPEVLSIRNNVSYRETRKIS
QVLSQVTFYKPQQVTVRCETSNQAGLLDRRDVKLVSSTLYSQVAVLAAVLALVVIIIISI
IILIAVWRKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEMQRDNLVLGRTLGSG
AFGRVVEATAYGLTHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLG
ACTKNGPLYLVTEYCRYGDLVDYLHRNKHTLLQYYAEKNQDDGCLISGGSTPLSQRKGYV
SFGSESDGGYMDMSKDEPTIYVPMQEQMDSIKYADIQPSPYESPYQQDIYQEQGGGGLDL
AISDSSILTYDDLLGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARD
IMHDSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMN
ELFYSALKRGYRMAKPAHASDEVYDIMKKCWDEKFEKRPDFSFLVHSVGNMLTDSYKKQY
SQVNDNFLKSDHPAVARTKPRLSSPFPIANPAFGSPSPLYMPPDPYSQSPSPEFRQEADT
QEVMTSYNEYIIPIPDPKPEDVFTDVPSESPASSLALEEETDSMSQDTADTLPEEDRLEE
TSERDALLGSAGTPEVEDSFL
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgggtgacggcatccacgctacatctgacagtcacggttacagctcttctgtat
ttctgcaccgagctctgctgtctggagatcacacccgatgacaaagagctggtcctggct
gagggctcctcgctcagcctcacctgctccggctcaggggacacaacgtgggtgttcaag
agggacgatgtgccgtacttccaagtggaatttcaaaatggtggtcaaagctaccaagtt
gtgcaaagcagcatcacatccagtgttttgaccttgtggaacgtgagctggaagcacacg
ggggtgtatcagtgcgttgatcaacacactggagaaactaaggaggtggctgtttttgtc
ccagaccctgatgtgtggttcatagagagctcccacggcatggtaacaaagaccagcgag
gagagcaccgtcccctgtgtggtcaccaacccaaacatcaatgtcaccctgtatgagagg
gacactgatctgcccatcaggggactttatgttccaagtgaggggtacaaggcacggctg
gaggacaggacctatgtgtgccggggagagctgaacgaggaggtgaaagagtctcaggcc
ttctacgtcttcagcattgtcgtcccagaggccatcgacgcctacatcaatgcgtcaaag
accgtcctgaagcagggcgaaccactgacagtaaactgcacagtgcacggagtggagctc
gtgtttttttcctgggatatccccaacagagaggttgtagcggttgagccgctgacagac
gtcctgtctgccatgagcatgcgctcctacctgatcttccctcatgccacggtggcccac
agcggaaattacgtctgccatgtccacgagcatgtcctagaccagactgcctcggccagc
gtcaacatcaccgtgctcgagcaaggcttcgtggatgtgaaggctcctcagcaacaaaat
atttcagccaagctgcaagagaacgtggagctgagagtggagattgaagcctaccccccc
cctcaggtccgctggagcaaagatggcgccaccatcaaaagagataaaaccatcacaacc
agacaagagcatgagatcaggtatgtcactactctcaccttggtgagggtgaggacggag
cagaagggtctctacaccgtccttgtcacaaacgaagatgacacaaaggaagtgaccttt
gacctggaggtccaagttccttctcagattaaagaactgactgacaaccacctccctggg
aagagacacttggtgacctgtgtagctgagggggtcccaaccccaaccatccaatggtac
agctgtgacagcatgcacaagtgtagcaaccagacagcggcgtggcagccgctgatacca
gagccagaggtgctgagtatccgcaacaatgtcagctacagagagactcgtaaaatcagc
caggtgctgagccaggtgaccttctacaaaccccagcaggtcacagtgcgctgtgagacc
agcaaccaagcaggactcctcgacagaagagacgtcaaactggtgtccagcacactgtac
tcccaggtggcagtattggctgccgttttagccttagtggtcatcattatcatatctatc
atcatcctcattgctgtatggaggaagaaacctcgatatgagatcagatggaaggtgata
gagtctgtgagccaggacggtcatgagtacatctatgtggaccccatccatctgccctat
gacctggcctgggaaatgcagcgagataacctggtgctgggtcgcactcttggatcagga
gcctttggcagggtggtcgaggcaactgcctatggtctcactcattcccagtccagcaca
aaagtggctgtgaaaatgctgaaatctacagccaggagaagtgagactcaggctctgatg
tcagagttgaagatcatgagtcacctgggccctcacctcaacatagtaaacctgcttgga
gcttgcaccaaaaatggccctctgtacctggtgacagagtactgtcgctatggcgacctg
gtggactacctgcacaggaacaagcacaccctcctgcagtactacgctgagaagaaccaa
gatgacggctgcctcatctctggaggaagcactccgctcagccagaggaaaggttatgtg
tccttcggaagtgagagtgatggaggatacatggacatgagtaaagacgagcccaccatc
tatgtgcccatgcaggagcagatggacagcatcaagtatgcagacatccaaccctctcca
tacgagtctccctaccagcaggacatctatcaggaacaaggtggcggtggattggacctg
gccatcagtgactcttccattctcacctatgacgatctgttgggcttcagctaccaagta
gcgaaggggatggagttccttgcctcaaagaattgcgtccatcgggacctcgctgccagg
aatgtgttgatctgcgaggggaaactggtgaagatctgtgactttggcctggccagagac
atcatgcatgattccaactacatctctaaaggcagcactttcctgcccctgaagtggatg
gcaccagaaagtattttccataatttgtacaccaccctgagcgacgtgtggtcctacggc
attcttctttgggagatttttacattgggaggaaccccttaccctgatttgcccatgaat
gagttgttctacagtgctttgaagagaggctaccgaatggccaaacctgcccacgcctct
gatgaagtttatgacatcatgaagaagtgctgggacgagaagtttgagaaaaggcctgat
ttctcatttctggtccacagtgtggggaatatgttgacagacagctataaaaagcaatac
agccaagtcaacgacaacttcctgaagagtgaccacccggcagtcgcccgcaccaaaccc
agactctcctcaccctttccgatcgccaacccagcatttggctccccatcccccctctac
atgcccccggacccctacagccagagcccgagcccagagttcagacaagaggcagacaca
caggaagtcatgacttcatacaatgaatacatcattcccatcccagaccccaagccggag
gacgttttcactgacgtgccatcagaaagccctgcaagctctctggctctggaggaggag
actgactccatgtcgcaggacacagctgatactctcccagaagaggacaggctagaggag
accagcgagagagacgctctgctgggctccgctgggacgcccgaggtagaagacagcttc
ttgtag
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