Sander lucioperca (pikeperch): 116065150
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Entry
116065150 CDS
T07345
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04620
Toll-like receptor signaling pathway
sluc04621
NOD-like receptor signaling pathway
sluc04622
RIG-I-like receptor signaling pathway
sluc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116065150 (traf3)
04621 NOD-like receptor signaling pathway
116065150 (traf3)
04622 RIG-I-like receptor signaling pathway
116065150 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116065150 (traf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4
Sina_ZnF
zf-C3HC4_2
zf-RING_UBOX
MctB
zf-RING_4
zf-C3HC4_4
bZIP_2
ATG16
Fez1
Crescentin
KxDL
DUF4201
EzrA
Fzo_mitofusin
CENP-F_leu_zip
YabA
CorA
GAS
Phage_GP20
Motif
Other DBs
NCBI-GeneID:
116065150
NCBI-ProteinID:
XP_035854518
Ensembl:
ENSSLUG00000022779
LinkDB
All DBs
Position
2:45313211..45355931
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AA seq
610 aa
AA seq
DB search
MSAGRSADGREVQIPLQQVAPSLTTPLSVVPPPHRPANPWPPGDPTPSPGVPAGFLPLHG
GFRDHFVETPESKYCCEACRLVLCQPRQTECGHRFCQSCINDILSRPSVVCPADMEPLFK
DKIFKDVCCHREIMALKVYCRSEANGCQETMSLQQIPEHLNVCAFYEVPCPLGKCKERMM
RKDIPDHLSWKCKHRESSCDFCKTKMPLTDLQKHKETVCPAFPVSCPNLCSFSSLPRSEL
SNHQHDCPKAQVCCQFHRYGCTFKGLNQDLRTHESASAAEHLRMMANRNSTLENKVDDLK
GELLERYKVLPALSSRLSDLEKQNDELREKNRQMEQKLATMQKVMSSHSEKLLETELELR
SLRLLRDDVENLRGTLDAVRTRLTSLEQGGRSGTGASTHTLASLETQLNRHDDMLSVHEI
RLADMDLRFQVLETASYNGTLIWKIRDYKRRKQEAVAAKTLSLYSQPFYTGYFGYKMCAR
VYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDLSLSLTCLSLCQVTLML
MDQGPTRKHLGDAFKPDPNSSSFRRPVAEMNIASGCPLFVSQSVLETGSYIRDDTIFIKV
TVDTSDLPDP
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcggggaggagtgctgacgggagggaagtgcagattcccctccagcaggtggcg
ccctccctgaccacgcccctctccgtggtcccgccccctcaccgcccagccaatccctgg
cctcccggtgaccccaccccctctccaggtgtccctgctgggttcctccctctccacgga
gggttcagagaccacttcgtggagactccagagtctaagtattgctgcgaggcctgcagg
ctggtcctgtgtcagccgcgccagaccgagtgtggacaccgcttctgccagagctgcatc
aacgacatcctcagtcgtcccagcgtggtctgtcctgcagacatggagcctctgttcaaa
gacaagatctttaaagacgtgtgctgccatcgggagatcatggcgctcaaggtgtactgt
cgcagcgaagctaacggctgccaggagaccatgagtctgcagcagataccggagcacctg
aatgtgtgtgcgttctacgaggttccctgtcctctggggaaatgtaaggagcgaatgatg
aggaaagatattcccgaccacctgagctggaaatgtaaacacagagagagcagctgcgac
ttctgcaagaccaagatgcctctgacggacctgcagaaacataaggagacggtgtgtccg
gcgttccccgtgtcgtgtcccaacctctgctccttctcctcgctcccccgcagcgagctg
tccaatcaccaacacgactgtcccaaagctcaggtgtgctgtcagttccaccgctatggc
tgcaccttcaaggggttgaaccaggatctgaggacacatgagtcggcgtctgcagctgaa
cacctgaggatgatggccaataggaactccacgttagagaacaaggtggatgatcttaaa
ggggagctgttggagaggtataaagtgctcccagctctcagcagtcgactgtctgacctg
gagaaacagaacgacgagctgagagagaagaaccgacagatggagcagaaactggccacc
atgcagaaagtgatgagctctcactctgagaagctgctggagacggagctagagctgcgt
tctctgcgtctgctgcgagacgacgtggagaacctgagaggaacgctggacgcggtccgc
accagactcacctcgctggagcagggggggcgcagcgggacaggggccagcacacacact
ctggcatctctggagactcagctgaatcgccatgacgacatgctgagcgtgcacgagatc
cgattggccgacatggacctgcgtttccaggtgctggagacggcgagctacaacgggacg
ctgatctggaagatccgcgactacaagcggcggaaacaggaagccgtggcggccaagacg
ctgtcgctgtactcgcagcccttctacacgggctacttcggctacaagatgtgcgcccgc
gtgtacctgaacggagacggcatgggcaagggcacgcacctgtcgctgttcttcgtggtc
atgaggggcgagtacgacgccctgctgccctggcccttcaagcagaaggtgacgctgatg
ctgatggacctgtctctctctctaacctgtctgtctctctgtcaggtgacgctgatgctg
atggaccagggaccaaccaggaaacatctgggcgatgcgttcaagcccgatcctaacagt
agtagtttccggcgcccggtggccgagatgaacatcgcgtccggctgtccgctgttcgtc
tctcagagcgtcctggaaacaggaagttacatcagagacgacaccatcttcatcaaggtt
accgtggatacgtctgacctccctgacccgtga
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