KEGG   Sander lucioperca (pikeperch): 116065292
Entry
116065292         CDS       T07345                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
sluc  Sander lucioperca (pikeperch)
Pathway
sluc03420  Nucleotide excision repair
sluc04110  Cell cycle
sluc04114  Oocyte meiosis
sluc04120  Ubiquitin mediated proteolysis
sluc04141  Protein processing in endoplasmic reticulum
sluc04310  Wnt signaling pathway
sluc04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    116065292 (rbx1)
   04120 Ubiquitin mediated proteolysis
    116065292 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    116065292 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    116065292 (rbx1)
   04350 TGF-beta signaling pathway
    116065292 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    116065292 (rbx1)
   04114 Oocyte meiosis
    116065292 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sluc04121]
    116065292 (rbx1)
   03400 DNA repair and recombination proteins [BR:sluc03400]
    116065292 (rbx1)
Enzymes [BR:sluc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     116065292 (rbx1)
Ubiquitin system [BR:sluc04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   116065292 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     116065292 (rbx1)
   Cul2 complex
     116065292 (rbx1)
   Cul3 complex
     116065292 (rbx1)
   Cul4 complex
     116065292 (rbx1)
   Cul7 complex
     116065292 (rbx1)
   Cul8 complex
     116065292 (rbx1)
   Cul9 complex
     116065292 (rbx1)
DNA repair and recombination proteins [BR:sluc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      116065292 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      116065292 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 116065292
NCBI-ProteinID: XP_031176596
Ensembl: ENSSLUG00000001701
UniProt: A0A8C9X2A9
LinkDB
Position
21:complement(16754823..16758130)
AA seq 108 aa
MAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcagcagctatggatgtagatacgccaagcggcacaaacagtggagctagcaaaaag
cgatttgaagtaaagaagtggaatgctgtggcactgtgggcctgggacattgtggtggat
aactgtgctatctgtcggaaccacatcatggatctctgtatagagtgccaggccaaccaa
gcttctgcaacctctgaggagtgcactgtagcctggggtgtctgcaaccatgccttccat
ttccactgtatttcccgctggctgaaaaccagacaggtgtgccctctggacaacagggag
tgggagtttcagaaatacggacactag

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