Sander lucioperca (pikeperch): 116065292
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Entry
116065292 CDS
T07345
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03420
Nucleotide excision repair
sluc04110
Cell cycle
sluc04114
Oocyte meiosis
sluc04120
Ubiquitin mediated proteolysis
sluc04141
Protein processing in endoplasmic reticulum
sluc04310
Wnt signaling pathway
sluc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116065292 (rbx1)
04120 Ubiquitin mediated proteolysis
116065292 (rbx1)
09124 Replication and repair
03420 Nucleotide excision repair
116065292 (rbx1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
116065292 (rbx1)
04350 TGF-beta signaling pathway
116065292 (rbx1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116065292 (rbx1)
04114 Oocyte meiosis
116065292 (rbx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116065292 (rbx1)
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116065292 (rbx1)
Enzymes [BR:
sluc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
116065292 (rbx1)
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
116065292 (rbx1)
Multi subunit type E3
SCF complex
Ring finger protein
116065292 (rbx1)
Cul2 complex
116065292 (rbx1)
Cul3 complex
116065292 (rbx1)
Cul4 complex
116065292 (rbx1)
Cul7 complex
116065292 (rbx1)
Cul8 complex
116065292 (rbx1)
Cul9 complex
116065292 (rbx1)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
116065292 (rbx1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
116065292 (rbx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
116065292
NCBI-ProteinID:
XP_031176596
Ensembl:
ENSSLUG00000001701
UniProt:
A0A8C9X2A9
LinkDB
All DBs
Position
21:complement(16754823..16758130)
Genome browser
AA seq
108 aa
AA seq
DB search
MAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagctatggatgtagatacgccaagcggcacaaacagtggagctagcaaaaag
cgatttgaagtaaagaagtggaatgctgtggcactgtgggcctgggacattgtggtggat
aactgtgctatctgtcggaaccacatcatggatctctgtatagagtgccaggccaaccaa
gcttctgcaacctctgaggagtgcactgtagcctggggtgtctgcaaccatgccttccat
ttccactgtatttcccgctggctgaaaaccagacaggtgtgccctctggacaacagggag
tgggagtttcagaaatacggacactag
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