Sander lucioperca (pikeperch): 118495394
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Entry
118495394 CDS
T07345
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sluc04515
]
118495394
Cell adhesion molecules [BR:
sluc04515
]
Cadherins
Protocadherins
118495394
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
118495394
NCBI-ProteinID:
XP_035858713
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Position
1:complement(33312151..33315182)
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AA seq
929 aa
AA seq
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MGFMERGIMLNKLPAWQVFLWWHHFFLLWSTIDGQTRYSIPEELKQGSVVGNLAKDLGLV
VSELHRRKLRITSEAGKQYFSVDLGKGEMVVSDRIDREELCGQRPSCVLPLELVLDNPLQ
LHRVEIEIYDTNDNSPSFVTKEKVVKIAELVNPGARFPLESAQDPDVGPNSVRSYLISKN
ENFKLTIKNHKDGRKIPELVIEKPLDREKLPVHNLILTAVDGGDPVRSGTSEITVIVLDI
NDNAPQFEKQVYEANVSEKATPGTEILHVKATDADEGLNGEIEYLFSEQTTDLILALFDI
DPSTGAIIVKGILDHETNPLHRFDITAKDKGNPEMDGHCGVEIKIVDINDNVPEIIVTSL
TTPVPEDSAIGTVIALISAKDPDSGDNGKITLSVSSKSPFKLNPSVSNHYSLVTNGPLDR
EINSQYSVKISATDSGKPALSSEKIILVELLDVNDNPPVFSQPSYVVYVKENHAPGKILC
SVSATDPDSGDNAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQIQV
QAKDQGSPSLSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKVT
AVDADSGHNAWISYKLAEATDASLFTVNLYTGEVRTKRAVSEQDDSSQRLLIEIQDDGEP
VQSATVTVSILLEDGLHEPILDLRQKVAEPSKKTGRITLYLILSLASVSVLSLVTFLILA
VKCMRNSRSSGSCCMRRSDCDDYKNPNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFRSC
MSPMSEYSDFTLIKPSSTNDFKEVISVLDASLPDSTWTFESQQVSKTKCVFNIISIYLSI
YLFIYLSMKTNSRQGCVQKQLRHTVCQYNLTRTHFQSHFCNSSAPRRWTATLSGMLISMC
VRACVSPLLLIIFLEINTKIVLPKRVSSD
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgggatttatggaacgaggaataatgttgaacaaattgccggcatggcaggtgtttttg
tggtggcatcatttctttctcttgtggagtacaatagacggacagactcgctacagcatc
ccggaggaactgaaacagggctctgtggtaggaaatctagccaaagatttgggtttggtt
gtatctgaactgcacagacgtaaattgcggataacctcggaagctggtaagcagtatttt
agtgtggacttggggaagggagaaatggtggttagtgataggatagatagggaagaactg
tgtggacaaagaccgtcatgtgtgttgcctttagaactagtcctagataaccccctacag
ctgcatagagtagaaattgaaatatatgatacaaacgataattctcctagtttcgttact
aaagagaaagtggtgaaaattgcagagctggtcaatccaggtgcgcgattccctttagaa
agtgcacaggatcccgatgtcggccctaattctgtacgctcttatcttataagcaaaaat
gaaaatttcaaattgacaattaaaaaccacaaggacggaaggaaaatccctgaactggtc
atcgaaaaacctcttgatcgagaaaagctgccagtacacaatcttatcctcaccgctgta
gatggtggagacccggtgcgctcagggacatctgaaattacagttatagtacttgacatc
aatgataatgcgccgcaatttgaaaaacaggtatatgaggctaatgtcagcgaaaaggca
acacctggaacggaaatattgcatgttaaagctacagatgccgatgaaggactaaatgga
gaaattgaatatttgttttcagagcaaactacagatctgattttagcattatttgacatt
gacccttctactggagctattattgtgaaaggtattttagatcatgaaacgaacccttta
catagatttgacataactgctaaagacaaaggtaatcctgagatggatgggcattgtggc
gtggaaattaaaatagttgacattaacgacaatgttcctgaaataattgtgacgtcttta
acaacacctgttccagaagactctgcaattggaacagttattgcattgataagtgcaaaa
gacccagactccggtgacaatggtaagattacgttaagcgtgtcttccaaatcccccttc
aagttaaatccttctgtctctaaccattactcattagtaacgaatgggccacttgaccgt
gaaataaatagccagtatagtgtaaagataagtgctactgattctggtaagcccgcatta
tcgagtgaaaaaataatacttgttgaattgttagatgtaaatgacaacccaccagttttc
tcccagccttcttatgtcgtttatgtaaaagagaaccatgctcctgggaagattttgtgc
tcagtgtcagcaactgatcctgattcgggtgacaacgcgaagatctcctactcaatcttg
gactctaaagtgcaggacgtttctgtctcatcttatgtttacattaactcagataacggc
agcatctacagcatgcactcgtttgactatgagaaactgaaggtgtttcagattcaggtt
caggcaaaggatcagggctctccgtctctcagcagcaacgccactgtccatgtttttatc
ctggaccagaacgacaatgcccccgctgttatttacccctcctccgctgccctgggctcc
ctctctcatcagaggatgccccgctccgctaaagcaggccacctggttactaaggtgaca
gccgtggacgctgactcgggccataacgcctggatctcctacaaactggcggaggccaca
gacgcctctctgttcactgtcaatctgtacacaggagaggtgaggactaaacgcgctgtg
tccgagcaggacgactcctctcagaggctgcttatagagattcaggacgacggggaaccg
gtccagtccgccactgtcacggtgtccatcctgctggaggacggcctccatgagcccatc
ttagacctccgacagaaagtggccgagcccagcaagaaaactgggagaatcaccctttat
ttgattctctctctggcctcggtgtccgtgctgtctctggtgacttttctcatcttagcg
gttaaatgcatgaggaacagcagaagcagcggtagttgctgcatgagacggagcgactgt
gatgattacaagaaccccaacagaaacctgcagattcagctcaacactgatggacctata
aagtacgtggaggtcctgggaggagacatgatgtctcagagtcagtccttcaggtcctgt
atgtctccgatgtcagagtacagtgatttcactttgattaagcccagcagcaccaatgac
tttaaggaggtgatcagtgttctggatgcgtctttacccgacagcacctggacctttgag
agccagcaggtgagcaaaactaaatgcgttttcaatattatatctatctatctatctatc
tatctatttatctatctatctatgaaaactaatagtaggcaaggctgtgttcaaaaacag
ttaagacatacagtatgtcaatataatctcacacgcacacatttccaaagccatttctgt
aatagttcagcaccacgaaggtggacagcaactcttagtggaatgcttattagtatgtgt
gtgagagcgtgtgtttcgcccctgttgctgatcatctttttagaaataaatacaaaaata
gtgttacctaagcgtgtttctagtgattga
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