Saccharomycodes ludwigii: SCDLUD_000168
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Entry
SCDLUD_000168 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
slud
Saccharomycodes ludwigii
Pathway
slud00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SCDLUD_000168
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
slud01007
]
SCDLUD_000168
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slud03016
]
SCDLUD_000168
Enzymes [BR:
slud01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
SCDLUD_000168
Amino acid related enzymes [BR:
slud01007
]
Aminoacyl-tRNA synthetase
Class I (U)
SCDLUD_000168
Transfer RNA biogenesis [BR:
slud03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SCDLUD_000168
Prokaryotic type
Other AARSs
SCDLUD_000168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
FLAD1_M
Motif
Other DBs
NCBI-GeneID:
70105490
NCBI-ProteinID:
XP_045936516
LinkDB
All DBs
Position
I:complement(427238..430450)
Genome browser
AA seq
1070 aa
AA seq
DB search
MSHQPFSFPKEEERILQNWNEINAFQTSLKLTEGKPEFSFFDGPPFATGTPHYGHILAST
TKDIVPRYATMNGYHVERRFGWDTHGLPIEHIIDKKLNITCKEDVFKFGLDNYNNECRAI
VMTYADEWRQTIGRLGRWIDFDNDYKTMYPSFMESVWWAFQQLYNKEQVYRGYRVMPYST
GCTTPLSNFEAQQNYKDVNDPAVTIGFNVVGQEKTQIVAWTTTPWTLPSNLSLCVNPDFE
YVKIYDEKRDRYFILMESLIKNLYKKPKGEKYKVVEKFKGKDLVGLKYEPLFPYFVKDFG
ERAFRVISDGYVSNDSGTGVVHNAPAFGEEDYNACLSNGIISEDTVAPNPVDDAGKFTKE
VSDFQGVYVKDADKLIIKYLTESGNLLLASQIRHSYPFCWRSDTPLLYRTVPAWFVRVKP
IINKFLDSVSKSNWVPSNIKEKRFSNWIANARDWNVSRNRYWGTPIPLWVSEDFEEVVCI
GSIEELKKLSGVQDITDLHRDTIDHITIPSKKGKGDLKRIEEVFDCWFESGSMPYASQHY
PFENTEKFQDRVPANFISEGLDQTRGWFYTLGVLGCHLFGEVPYKNVIVSGIVLAADGRK
MSKSLKNYPDPNIILNKYGADALRLYLINSPVLKAESLKFKEEGVKEVVSKVLLPWWNSF
KFLEGQIQLLNKTHEIGFKYDPEVKSDNVMDRWLLASLQSLVQFIHQEMTAYKLYTVVPK
LLDFIDQLTNWYIRFNRRRLKGEDGVDDCIKALNTLFEALFTFVRAMAPFTPFLSDNIYL
RLKEYIPKNILAQFGENANSVHFLSYPVVRKEFFDTKIELAVSRMQSVIELGRNIREKKM
ISLKTPLKTLVILHSDKQYLSDIESLQKYIVEELNIRDLVITSDEEKYHIEYKAAADWPV
LGKKLKKDVKKVKDALPNLTTHDVQCYLKNGTIEVAGIKLVSGDLTVIRTLPESVVEEGL
ETRTDQDVLIILDTKIYPELKNEGLAREIINRVQKLRKKCGLEATDDVLVEYELIKDTIN
FDDIVKEYYDTLSKTCRSEIKKYDGLKTNVIADEEQSINDTIFKLKIFKL
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatcaacctttttccttcccaaaggaggaagaaagaattttacaaaattggaac
gaaatcaacgcatttcaaacttctttaaaattaactgaaggtaagccagaattttcattt
tttgatggccccccatttgccaccggtacacctcattatggacatattttagcctccacc
accaaggatattgttccaagatatgctactatgaatggatatcacgttgaaagaagattt
ggttgggacactcatgggttaccaattgaacatattattgacaaaaaattaaatatcaca
tgtaaagaagatgttttcaaatttggtttggataattataataacgaatgtagagccatt
gttatgacttatgctgatgaatggcgacaaactattggccgtttagggcgttggattgat
tttgacaatgattataagaccatgtatccaagttttatggaatctgtctggtgggctttt
caacaattgtataataaagaacaagtttacagaggttacagggttatgccttattctacc
ggctgtactactccactaagtaattttgaagctcaacaaaactataaggatgtaaacgac
cctgctgtcactattggtttcaatgttgttggccaagagaagacacaaattgttgcttgg
accaccacaccatggactttaccttctaatttatccctatgtgttaaccctgattttgag
tatgttaagatttacgatgaaaaaagggacagatattttattttgatggaatctttaatt
aagaacttatacaaaaagccaaaaggtgaaaagtataaggttgttgagaaatttaaaggc
aaggatttagttggcctaaaatatgaaccattgttcccatattttgttaaagactttgga
gagagagctttccgggttatttctgacggctatgtttctaatgattctggtacaggtgtt
gttcacaatgctcctgcttttggtgaagaagattacaatgcttgtttgtccaatggtatc
atcagcgaggataccgttgctccaaacccagttgacgatgccggtaagttcactaaggaa
gtttctgatttccaaggtgtttatgtcaaagacgcagataaattaattattaaataccta
actgaaagtgggaacttattactggcttcccagattcgccatagctatccgttctgttgg
agatctgatactccgttgttatacaggactgttccagcctggtttgtccgtgttaagcct
attatcaataaatttttagattctgtttcgaaatccaattgggttccatcaaatattaag
gaaaaaagattttccaactggattgccaatgctcgtgactggaatgtctccagaaataga
tattggggtactccaattccactatgggtttctgaagattttgaagaggtagtttgtatt
ggttctatcgaagaattgaaaaaattatctggtgtccaagatattactgatttacatcgt
gatactattgaccacattacgattccatccaaaaagggtaaaggcgacttgaagagaatt
gaagaagtttttgattgttggtttgaatccggttcaatgccatatgcttctcaacattat
ccatttgaaaacactgaaaaatttcaagatagagttccagccaattttatttccgaaggt
ttggatcaaacaaggggctggttttacactttgggtgttttgggctgtcatttatttggc
gaggttccttataagaatgttattgtttctggtattgttttagccgcggatggtagaaaa
atgtccaaaagtttaaagaattacccagatccaaatattattttgaataaatacggtgct
gacgctttaagattatatttaatcaactcccctgtcttgaaagctgagagtttgaaattt
aaggaggaaggtgtaaaggaagttgtttccaaagttttattaccatggtggaattccttc
aaatttttggaaggccaaattcaattgttgaataagactcatgagattggttttaaatat
gatccagaggtaaaatctgacaatgttatggacagatggcttttggcttccttacagagt
ttggttcaatttatccaccaagaaatgactgcctacaaattgtacactgttgttcccaaa
ttattagattttattgatcaattaacaaattggtatattagatttaatagacgtcgtttg
aagggtgaagatggtgtagatgattgtattaaagcgttgaacactttatttgaagcttta
ttcacctttgttcgcgctatggctccatttacgccatttttatcagataatatctacttg
aggttgaaagaatatattccaaaaaatatattggctcagtttggtgaaaacgctaactca
gttcatttcttgtcctatccagttgtcagaaaagaattttttgacactaaaattgaatta
gcagtttccagaatgcaaagcgttattgaattgggtagaaatattcgtgaaaagaaaatg
atttctttgaagaccccgttaaaaactttggttattttgcacagtgataaacaatattta
tctgacattgaatctttgcagaaatacattgttgaagaattgaatattcgtgatttagtt
attacttcggatgaagaaaaataccatattgaatacaaggcagctgctgattggccagtt
ttgggtaagaaattaaagaaggatgttaagaaggttaaggatgctttaccaaatttaacc
acccatgatgtccagtgctatttaaagaatggtacgatagaggttgctggtattaaatta
gttagtggtgacctaactgttatcagaactttaccagagtctgtggtcgaggaaggttta
gaaactagaactgaccaggatgttttgattattttagacaccaagatctaccctgagttg
aagaacgaaggtttagcaagagaaatcattaacagagttcaaaaattaagaaagaagtgt
ggcttagaggccactgatgatgtcttagttgaatacgaactaattaaggataccattaat
tttgatgatattgtcaaagaatattatgatactttgtctaagacttgtagatctgaaatt
aagaagtatgatggcttgaagacgaatgttatcgctgatgaagaacaatccattaatgat
actattttcaaattaaagattttcaaattgtga
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