Saccharomycodes ludwigii: SCDLUD_000665
Help
Entry
SCDLUD_000665 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCDLUD_000665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slud03019
]
SCDLUD_000665
Messenger RNA biogenesis [BR:
slud03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
SCDLUD_000665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
RsgA_GTPase
AAA_29
AAA_23
AAA_15
Sigma54_activat
Dynamin_N
Rad17
MMR_HSR1
AAA_28
AAA_25
Motif
Other DBs
NCBI-GeneID:
70105987
NCBI-ProteinID:
XP_045936982
LinkDB
All DBs
Position
I:1558694..1559530
Genome browser
AA seq
278 aa
AA seq
DB search
MKNNTTSSKFAVEVNDLNYQFSGSTQEALHDIKLQIPWNSRTLLIGSNGAGKSTLLKLLA
GKQLCLTGEIFINGINPFSSQYRNEQEFGMNTSTYLGTEWCHMEIINRDIGVLELLDSIG
YTRFFKQRGDELIKILEVDLEWRMHKLSDGQKRRVQLVMGLLKPFKLLLLDEVTVDLDVV
ARSKLLKFLKLETEIRECSVIYATHIFDGLNEWPLRLIHMSKGSIVQDVDYKKNVVFRND
KSGGDIVGTNGSVIEVEMCKSLHPLALKWLLKDQNTDL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaataccacctcttcgaaatttgctgtcgaagtcaatgatttaaactatcaa
ttttcaggttcaactcaagaagctttacacgatataaaactacaaattccatggaattca
agaactttattaattggttccaacggtgctgggaaatccacattactaaaattattagca
ggtaagcaattatgcctaactggtgaaatttttattaatggtatcaatcctttttcatct
cagtacagaaatgaacaagaatttggtatgaatacttcgacttatttgggaacagaatgg
tgccacatggaaattatcaatagagatattggtgtattagaattattagacagtatagga
tacaccaggtttttcaaacaaagaggtgatgaattgattaaaattttagaagtcgatctg
gaatggaggatgcacaaattaagtgatggacaaaaacgaagagtacaattggtaatggga
ttgttaaaaccatttaaacttttattattggatgaagttactgttgatttagatgttgtt
gcaagatctaaattgttaaaatttttaaaattagaaacagagattagagagtgcagtgtt
atctacgccacacatatttttgatggcttgaatgaatggcctcttcgattaattcatatg
agtaaaggttctattgtacaagatgtcgattataaaaaaaatgttgtttttaggaacgac
aagtctggtggtgatattgttggtactaatggctcggttatagaagtggagatgtgcaaa
agtttacatcccttagcgttgaagtggttattaaaagatcaaaataccgatttataa
DBGET
integrated database retrieval system
