Sphingomonas lutea: H9L13_05960
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Entry
H9L13_05960 CDS
T06880
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
slut
Sphingomonas lutea
Pathway
slut03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
slut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H9L13_05960 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slut03400
]
H9L13_05960 (nth)
Enzymes [BR:
slut01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
H9L13_05960 (nth)
DNA repair and recombination proteins [BR:
slut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H9L13_05960 (nth)
Prokaryotic type
H9L13_05960 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QNN68402
UniProt:
A0A7G9SKM7
LinkDB
All DBs
Position
complement(1156516..1157277)
Genome browser
AA seq
253 aa
AA seq
DB search
MTRDQIFEFFRRLAEANPSPQTELESNNPYQLLVAVVMSAQATDAGVNIATRPLFARIHT
PEQMVELGEENLREAIKTIGLFNTKAKNVIALSQALIRDHGSAVPRTRDELQALPGVGRK
TANVVLNTAFGEETFAVDTHVFRVSNRTGLAPGKTVEAVEARLEKIVPQPFRRDAHHWLI
LHGRYTCKARLPECWRCPVADLCRYQPKTRAPEARPKAARSARPAPSKARIAKARTGVTR
SASRSRSPASRLP
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
gtgacccgcgaccagattttcgaattcttccggcggctggccgaggcaaacccgtcgccg
cagaccgagcttgaatcgaacaatccgtaccaattgctcgtcgccgtggtgatgtcggcg
caagcgaccgatgccggcgtcaacatcgcaacccgcccgctcttcgcccgcatccacacg
cccgagcagatggtggaacttggcgaggagaacctgcgcgaggcgatcaagacgatcggc
ctgttcaacaccaaggccaagaacgtcatcgctttgtcgcaggcgctgatccgcgaccac
ggcagcgcggttccgcggacccgcgacgaactgcaggcgctgcccggcgtcgggcgcaag
accgccaatgtcgtgctcaacaccgcctttggggaggaaacgttcgcggttgatacgcac
gtttttcgcgtgtcgaaccgcaccggcctcgcgcccggcaagaccgtcgaagcggtcgag
gccaggctcgagaagatcgtgccccagccgttccgccgcgacgcgcatcactggctgatc
ctgcacggccgctacacatgcaaggcgcggctgccagaatgctggcgctgcccggtcgcg
gacctgtgccgttaccagcccaagacccgggcgcccgaggctagacccaaagccgctcga
agcgcgcgcccagcgccgtcaaaagctcgtattgcgaaagcccggactggcgtgacgcgc
tcggcaagtcgtagtcgatctccagccagtcgccttccttga
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integrated database retrieval system
