Solanum lycopersicum (tomato): 101245050
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Entry
101245050 CDS
T02665
Name
(RefSeq) very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2 isoform X1
KO
K10703
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [EC:
4.2.1.134
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00062
Fatty acid elongation
sly01040
Biosynthesis of unsaturated fatty acids
sly01100
Metabolic pathways
sly01110
Biosynthesis of secondary metabolites
sly01212
Fatty acid metabolism
Module
sly_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
101245050
01040 Biosynthesis of unsaturated fatty acids
101245050
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sly01004
]
101245050
Enzymes [BR:
sly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.134 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
101245050
Lipid biosynthesis proteins [BR:
sly01004
]
Fatty acid synthase
Component type
101245050
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PTPLA
Motif
Other DBs
NCBI-GeneID:
101245050
NCBI-ProteinID:
XP_010319237
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Position
4:complement(5288142..5294355)
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AA seq
221 aa
AA seq
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MAGVLSVLRRIYLTLYNWVVFFGWFQVFYFAVKTLKESGHEHVYDAVEKPLLLAQTAAIL
EILHGLVGLVRSPVSATLPQISSRLYVTWGILWSFPELRSHILVSSLVISWSITEIIRYS
FFGTKEAFGSAPSWLLWLRYSTFLLLYPSGITSEVGLIYSALPYIKGSDMYSLRMPNKWN
FSFDYYYAGLVALGIYVPGSPHMYGYMLGQRKKALSKSKKE
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggctggagttttatcagttctaagacgtatttacctcacactttacaattgggttgtc
ttttttggatggtttcaagttttttattttgctgtgaaaactctgaaagaatctgggcat
gaacatgtctatgatgctgtagagaagcctttgcttttagctcaaaccgcggccatttta
gagatacttcatggtttagtgggtttggtaagatcgccagtatcagcaacgcttccacaa
ataagttcaagattatatgtaacctggggtattctatggagtttccctgagcttcggtct
catattcttgttagttctctagtgattagctggtctataacggagatcattcggtattca
ttttttgggacaaaagaggcatttggctctgcaccttcgtggctcttgtggctaaggtat
agtaccttcttgttgctgtatcctagtggcatcacaagtgaagttggtttgatatatagc
gctctgccttacatcaagggatcggatatgtattctcttaggatgccaaacaaatggaac
ttctctttcgattactactatgcaggacttgttgccctcggtatctatgtcccaggtagt
cctcacatgtacggttacatgctcgggcagagaaagaaagctctctccaaatcgaaaaag
gagtag
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