Solanum lycopersicum (tomato): 101247534
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Entry
101247534 CDS
T02665
Name
(RefSeq) E3 ubiquitin-protein ligase MIEL1
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101247534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101247534
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101247534
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101247534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
101247534
NCBI-ProteinID:
XP_010323027
LinkDB
All DBs
Position
6:complement(51985041..51993086)
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AA seq
280 aa
AA seq
DB search
MDEDGENFVVDQPPPPEEELDRQDVGKLLYGCDHYRRRCKLRAPCCNEIFTCRHCHNEAK
NALTNPKERHELVRHNVKQVVCAVCDTEQQVAEICSECGVKFGEYYCEICRFYDDNRTKG
QFHCDDCGICRVGGRENFFHCKKCGSCYSVELRDNHLCVENSMKNHCPICYEFLFDSVKG
TTIMKCGHTMHMECHTEMIHQNQYRCPICSKSVLNMSGTWQRLDMEIEATAMPEEYRYEV
PILCNDCNSTGKAFFHILGHKCKHCNSYNTRMIGTGEDPR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagacggtgagaattttgtcgttgatcaaccgccgccgcccgaagaggagctc
gatagacaagatgtcggaaagttgctttatggatgtgatcattatcggcgacgctgtaaa
ctccgagccccttgttgcaatgaaatattcacttgccgtcactgccacaacgaggccaag
aatgctttgaccaatcccaaggaacggcacgaacttgtgcgccacaatgttaagcaagtt
gtttgtgctgtatgcgacactgaacaacaggttgctgagatctgttcagagtgtggcgtc
aaatttggggagtactattgtgaaatttgtagattttacgatgacaatagaacaaagggg
cagtttcactgtgatgactgtggaatttgcagggtcggtggtcgagaaaacttcttccac
tgcaagaagtgtggatcctgctattcggtggagctgcgtgataatcacttgtgtgtggag
aactcaatgaagaaccactgtcccatctgttatgagtttcttttcgactcagtgaaaggc
accacaattatgaagtgtggacatacaatgcatatggaatgccacacagagatgatccat
cagaaccagtatcgctgccctatatgctctaagtctgttctcaacatgtccggaacttgg
caaagattagatatggagattgaagctacagccatgcctgaagaatatcgttatgaggtt
ccaattctgtgcaatgactgtaatagtactggtaaagcattttttcacatacttggccac
aaatgcaagcattgtaattcatacaacacccgcatgattggtactggtgaagatccccga
tga
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