Solanum lycopersicum (tomato): 101252303
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Entry
101252303 CDS
T02665
Name
(RefSeq) transcription factor PIF4
KO
K16189
phytochrome-interacting factor
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
101252303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sly03000
]
101252303
Transcription factors [BR:
sly03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
101252303
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
bHLH_NPAS4
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
101252303
NCBI-ProteinID:
NP_001294937
UniProt:
A0A3Q7H9E8
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Position
7:59537668..59541399
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AA seq
517 aa
AA seq
DB search
MNPYLPEWNIETELPAPHQKKPMGFDHELVELLWRNGEVVLHSQTHKKQPGYDPNECRQF
NKHDQPTIRVAGNQTNLIQDDETVAWLNCPIDDSFDKEFCSPFLSDISTNPHLGEEPDKS
IRQSEDNNKVFKFDPLEINHVLPQSHHSGFDPNPMPPPRFHNFGSAQQKHHIVGGDQKGV
NFPPPIRSSNVQLGGKEARSNLMLQDIKEGSVMTVGSSHCGSNQVDTSRFSSSANRGLSA
AMITDYTGKISPQSDTMDRDTFEPANTSSSSGRSGSSYARACNQSTATNSQGHKRKSRDG
EEPECQSKADELESAGGNKSAQKSGTARRSRAAEVHNLSERRRRDRINEKMKALQELLPH
STKTDKASMLDEAIEYLKSLQMQLQMMWMGSGMASMMFPGVQHYISRMGMGMGPPSVPSM
HNAMHLARLPLVDPAIPLTQAAPNNQAAAMCQNSMLNQVNYQRHLQNPNFPDQYASYMGF
HPLQGASQPINIFGLGSHTAQQTQQLPHPTNSNAPAT
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatatcttcctgaatggaatattgagactgaacttcctgctccacatcaaaag
aagcctatgggatttgatcatgagctagtggagttgttgtggcgaaacggggaggtagta
ttacatagccaaacacataaaaaacagccaggttatgatcctaatgaatgcagacagttt
aacaaacatgatcaaccaacaataagagttgctggaaatcagactaatttgattcaagat
gatgaaactgtcgcgtggctaaactgccctatcgatgattcgtttgacaaagaattttgt
tcccctttcttatctgatatttcaacaaatcctcacctgggggaggagcctgataagtca
attaggcaatcagaggacaataacaaggttttcaagtttgatcctttagagatcaaccat
gttcttccgcaatcacatcattctggtttcgatccaaatccaatgccacctccaagattt
cacaactttggatcagcgcaacagaaacatcatatagtagggggggatcagaaaggtgtt
aactttcctccaccgataaggtcatccaatgtgcagcttggtggcaaagaagctagaagc
aatctgatgctgcaagatattaaagaggggtctgtgatgacagttggttcaagccactgt
ggcagcaatcaagttgatactagccggttttcaagtagtgcaaatagagggctgtctgca
gcaatgatcactgattataccggaaaaatcagtccacaaagtgatacaatggaccgagac
acatttgaaccagctaatacatcttcgtcttcaggaagatcgggtagtagttatgcaaga
gcatgcaatcaatctacagcgaccaatagccagggccacaaaaggaagagtagagatggt
gaagaaccagaatgccagagtaaagctgatgagctagaatcagctggaggaaacaagtca
gcccaaaaatctggaactgcccgaaggagccgtgctgcagaagtgcataatctctctgaa
aggagacggagggatagaatcaatgagaaaatgaaggccttgcaagagcttcttcctcac
tctactaagacagacaaagcatcaatgctggatgaggctattgaatacttgaaatcactt
cagatgcaactgcagatgatgtggatgggaagtggcatggcatcaatgatgttccctggt
gtccaacactacatttccagaatgggaatggggatgggtccgccttcggtgccttccatg
cacaatgctatgcatttagctaggcttcctttggttgatccagcaatccctttgacacaa
gctgcccctaataatcaagcagctgcaatgtgccagaattcaatgttgaatcaagttaac
tatcaacgccatttgcagaatcccaattttccagatcaatatgctagttacatggggttc
catccacttcaaggcgcttctcagcctataaacatttttggcttaggttcacatacagca
cagcaaactcagcagttaccgcatccaactaatagtaatgcacctgccacttga
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