Solanum lycopersicum (tomato): 101253854
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Entry
101253854 CDS
T02665
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101253854
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sly01007
]
101253854
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sly03016
]
101253854
Enzymes [BR:
sly01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
101253854
Amino acid related enzymes [BR:
sly01007
]
Aminoacyl-tRNA synthetase
Class I (U)
101253854
Transfer RNA biogenesis [BR:
sly03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
101253854
Prokaryotic type
Other AARSs
101253854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
101253854
NCBI-ProteinID:
XP_004250257
UniProt:
A0A3Q7IS42
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Position
11:complement(5711649..5728607)
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AA seq
1182 aa
AA seq
DB search
MEDVCEGKDFSFPNQEEKILQWWEEVKAFENQLEKTKNQPEYIFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQSMTGHHVTRRFGWDCHGLPVEHEIDEKLQIKTKQQVIEMGIDKYNEE
CRAIVTRYVGEWEKTVVRMGRWIDFQNGYKTMDLKYMESLWWVFAKLHEKGLVYRGFKVM
PYSTGLKTPLSNFEANSNYKEVSDPEIMVSFPIVDDPEGASFVAWTTTPWTLPSNLALCV
NANFVYVKVRNKFNGKIYVVAESRLAELPVEKAKKVAPNGPAADTQIPNSKTKPSGGKSQ
NVETYEVLDKFPGSSLVGKKYIPLFDYFKDFSDSAFRVVADDYVTSDSGTGIVHCAPAFG
EDDYRVCIANNIINKGETLVVAVDDNGRFTDRITDFREKYVKDADNDITQAVKDKGWLVK
SGKFMHSYPFCWRSDTPLIYRAVPSWFIMVEKIKDQLLENNKQTYWVPDFVKEKRFHNWL
ENARDWAVSRSRFWGTPLPVWASEDGVETIVMDSIDKLEKLSGAKVTDLHRHYIDHITIP
SRRGAEFGVLRRVEDVFDCWFESGSMPYAYIHYPFENVELFENNFPGHFVAEGLDQTRGW
FYTLMVLSTALFGKPAFRNLICNGLVLAEDGKKMSKRLKNYPQPSEVINDYGADALRLYL
INSPVVRAEPLRFKKEGVFAVVKDVFLPWYNAYRFLVQNAKRLEIDGFGPFIPSDQKTLQ
SSSNVLDQWINSATQSLVHFVRKEMDAYRLYTVVPYLLKFLDNLTNIYVRFNRKRLKGRT
GEGDCRTALSTLYYVLLTACKAMAPLTPFFTEVLYQNLRKVSKGSEESIHYCSYPTVEGQ
RWERIEQSVNRMMTLIDLARNIRERHNKPLKTPLREMVVVHPDSEFLDDIAGKLREYVLE
ELNIKSLVPCNDTLKYASLRAEPDFSVLGRRLGKSMGVVAKEVKAMSTADIIAFEKAGEL
TIASHALKLTDIKIVRGFKRPDNRKEDEMDAAGDGDVLVILDLRTDDSLFEAGVAREVVN
RIQKLRKKAALEPTDMVEVFFKSLDNDEKVSKQILESQESYIKDAIGSPLLPAELIPSHA
ITIDEDSFHGISNLSFVITLARPSLVFNADAITALYGGNTQYSQGLRTYLLMRDHHNLKS
EFQQGKGKITVKCIENQPPVEVILGKHVFLSVGDHFLNTKSQ
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgtatgtgaaggcaaagatttctctttcccaaatcaagaagaaaaaatcctt
caatggtgggaagaagtcaaagcattcgaaaaccagctcgaaaagacaaaaaatcaaccc
gaatacattttctacgatggtcctccatttgcaacaggtttacctcattacggccacata
ttagcaggtacaatcaaagatattgtgaccaggtatcaatcaatgacgggtcatcatgtg
acccgaagatttgggtgggattgtcatggattaccagttgaacatgaaattgatgagaaa
cttcagattaagactaaacaacaagtgattgaaatggggattgataagtataatgaggaa
tgtagagctattgtgacaaggtatgttggagaatgggaaaaaactgtggtgagaatgggg
agatggattgattttcagaatgggtataagactatggatttgaagtatatggagagtctt
tggtgggtttttgctaagctgcatgaaaagggtcttgtttatagaggcttcaaggttatg
ccttatagtactggtttgaagactccattatccaattttgaagctaattcaaattacaag
gaagtaagcgaccccgaaatcatggtttcattccctatagttgatgatcctgagggtgca
tcctttgttgcatggactactactccttggacccttccaagtaatcttgctctttgtgtc
aacgccaattttgtatacgtcaaggttcgcaataaattcaacgggaagatctatgtagtg
gcggaatctcgattggctgagctaccagttgagaaagccaaaaaggtcgctccaaatgga
cctgctgctgacactcaaatcccaaattctaagacaaagccttctggtggtaaatcacag
aatgtcgaaacttatgaagtgttggataaatttcctgggtcgtccctagtggggaagaag
tacattccactattcgattacttcaaggatttttctgattcagcattcagagtcgttgcg
gatgattatgtgacttctgacagtgggactggaattgttcattgtgctcctgcctttggt
gaggatgattatcgtgtttgcatcgcaaacaacataattaataagggggagaccctggtt
gtggcggtcgatgataatggccgctttacggataggattactgatttcagagaaaagtat
gtaaaggatgcagataatgatatcactcaagctgtgaaggataaaggatggcttgttaaa
tctggaaagttcatgcattcttaccctttttgctggagatctgatacacctctgatttac
agagcagttcctagttggtttattatggttgaaaagattaaggatcaattgctagagaac
aataagcaaacctactgggttcctgattttgtcaaggaaaaacgcttccacaattggtta
gaaaatgctagagactgggctgttagccgaagtaggttctggggtactcctcttcctgtg
tgggctagtgaggatggcgtggaaacaattgttatggactccatcgacaaactggaaaag
ctctctggtgctaaggtgacagacttgcatcgtcactacattgatcacattactatccca
tccaggcggggggctgaatttggcgttcttcgacgtgtggaggatgtatttgattgctgg
tttgagagtgggtcaatgccttatgcttatatccactatccttttgagaatgttgagctc
tttgagaacaatttccctggtcattttgtggcagaaggtcttgatcaaactcgtggatgg
ttctacacccttatggtcctttctaccgccctttttgggaaacctgcttttagaaacctc
atttgcaatggtcttgtcctggctgaggatgggaagaagatgagtaaacgattaaagaac
tatcctcaaccatcagaagttatcaatgattatggagctgatgcattgcgtttatatctg
ataaactcccccgttgtccgtgctgaacctctgcgctttaagaaagagggagtttttgct
gtcgtgaaagatgttttcttgccatggtacaatgcatataggttccttgttcagaatgca
aaaagacttgaaattgatgggtttggaccattcattccttctgatcagaaaaccttgcag
agttcttcgaatgtcttggaccaatggatcaattctgcaactcagagcttagtgcatttc
gtccggaaggaaatggatgcttatagattgtacacggtggttccatatctcctaaaattt
cttgataatttaacaaatatttatgtgcggttcaatcggaagagactaaaaggccgtact
ggtgaaggagattgcagaactgctctttcaactctgtactatgtgctgctgactgcttgt
aaagctatggcaccattaactccttttttcactgaggttctttaccaaaatttgcggaaa
gtttctaaaggatcagaggagagcattcactattgcagctatcctacagtggaagggcag
agatgggagcgtattgagcagagtgttaataggatgatgacccttattgaccttgcacga
aacattcgtgagcgtcacaacaaacctcttaaaactccactcagggaaatggtggttgta
catccagattcagaattccttgatgatattgcgggcaaattaagagagtatgtgctcgag
gagctaaacattaaatctttggtcccatgcaatgacacgttgaagtatgcttctttgcgc
gcagaaccagatttcagtgtgttgggaagaaggttggggaagtcgatgggcgttgttgcc
aaagaagttaaggccatgtcaaccgcagatataattgcttttgagaaagcaggagaactt
actattgcttcacacgctttgaagcttactgatatcaagattgttaggggtttcaaacgt
cctgataacaggaaagaggatgaaatggatgcagcaggggatggtgatgttttagtgata
ctggatttgcgtactgatgattcactctttgaggctggagttgctcgagaggttgtgaat
aggatccagaagctgagaaagaaagcagcgcttgaacccactgacatggtagaggtcttc
ttcaagtctttggataatgatgaaaaagtctctaagcagattttggagtctcaggaatca
tatattaaagacgccattggatctcctttgcttccagctgaactgatcccatcacatgcg
ataactattgatgaagacagtttccatggaatctcaaacttgtcctttgtgatcacctta
gcaagaccaagtctagtgttcaatgcagatgccatcactgctttatatggaggaaacaca
cagtattctcaaggcttacgaacttacctcctgatgagggatcatcataacctcaaatcg
gagtttcaacaaggaaagggaaagataactgtcaagtgcattgaaaatcagcctccagtc
gaggtgattctgggaaaacatgtcttcttgagtgtcggagatcatttcttgaatactaaa
tcgcagtga
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