Solanum lycopersicum (tomato): 101259644
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Entry
101259644 CDS
T02665
Name
(RefSeq) uncharacterized protein
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03420
Nucleotide excision repair
sly04120
Ubiquitin mediated proteolysis
sly04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101259644
04120 Ubiquitin mediated proteolysis
101259644
09124 Replication and repair
03420 Nucleotide excision repair
101259644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101259644
03400 DNA repair and recombination proteins [BR:
sly03400
]
101259644
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
101259644
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
101259644
Multi subunit type E3
SCF complex
Ring finger protein
101259644
Cul2 complex
101259644
Cul3 complex
101259644
Cul4 complex
101259644
Cul7 complex
101259644
Cul8 complex
101259644
Cul9 complex
101259644
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
101259644
TCR (transcription coupled repair) factors
Cul4-CSA complex
101259644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
101259644
NCBI-ProteinID:
XP_004241938
UniProt:
A0A3Q7HRF6
LinkDB
All DBs
Position
6:42188123..42191455
Genome browser
AA seq
118 aa
AA seq
DB search
MSTDVEMAAADEGSTVTAPPCCSSSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIM
DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagacgtcgagatggctgccgccgatgaaggatccaccgttaccgcacctcca
tgctgttcttcttcttcgaagaaacccaagcgttttgagatcaaaaagtggaacgctgtc
tctttatgggcttgggatattgttgtagacaactgtgctatttgcaggaaccatatcatg
gatctctgcattgaatgtcaagctaatcaagctagtgctactagcgaggagtgcactgtt
gcctggggtgtatgtaatcatgccttccactttcactgcatcagtcggtggctcaagacc
cgtcaagtgtgcccattagataacagtgagtgggagtttcagaagtatggtcactag
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