KEGG   Solanum lycopersicum (tomato): 101259644
Entry
101259644         CDS       T02665                                 
Name
(RefSeq) uncharacterized protein
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03420  Nucleotide excision repair
sly04120  Ubiquitin mediated proteolysis
sly04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    101259644
   04120 Ubiquitin mediated proteolysis
    101259644
  09124 Replication and repair
   03420 Nucleotide excision repair
    101259644
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sly04121]
    101259644
   03400 DNA repair and recombination proteins [BR:sly03400]
    101259644
Enzymes [BR:sly01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     101259644
Ubiquitin system [BR:sly04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   101259644
  Multi subunit type E3
   SCF complex
    Ring finger protein
     101259644
   Cul2 complex
     101259644
   Cul3 complex
     101259644
   Cul4 complex
     101259644
   Cul7 complex
     101259644
   Cul8 complex
     101259644
   Cul9 complex
     101259644
DNA repair and recombination proteins [BR:sly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      101259644
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      101259644
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_11
Other DBs
NCBI-GeneID: 101259644
NCBI-ProteinID: XP_004241938
UniProt: A0A3Q7HRF6
LinkDB
Position
6:42188123..42191455
AA seq 118 aa
MSTDVEMAAADEGSTVTAPPCCSSSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIM
DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 357 nt   +upstreamnt  +downstreamnt
atgtctacagacgtcgagatggctgccgccgatgaaggatccaccgttaccgcacctcca
tgctgttcttcttcttcgaagaaacccaagcgttttgagatcaaaaagtggaacgctgtc
tctttatgggcttgggatattgttgtagacaactgtgctatttgcaggaaccatatcatg
gatctctgcattgaatgtcaagctaatcaagctagtgctactagcgaggagtgcactgtt
gcctggggtgtatgtaatcatgccttccactttcactgcatcagtcggtggctcaagacc
cgtcaagtgtgcccattagataacagtgagtgggagtttcagaagtatggtcactag

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