Solanum lycopersicum (tomato): 101260141
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Entry
101260141 CDS
T02665
Name
(RefSeq) transcription factor PIF1 isoform X1
KO
K16189
phytochrome-interacting factor
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
101260141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sly03000
]
101260141
Transcription factors [BR:
sly03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
101260141
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
DUF5667
bHLH_LHW
GrpE
Motif
Other DBs
NCBI-GeneID:
101260141
NCBI-ProteinID:
XP_004240467
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Position
6:complement(1895940..1901057)
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AA seq
508 aa
AA seq
DB search
MNYCVVPDFKMDDDYYDIPSAIFNKKSTIADEEIMELVWQNGGVIMQSQNQRSVRKSNLF
PEQSAVEQTVAVSAPLYMQEDEMNSWLQSPLDDSSFDDFLNTTPSCDAVTSAAAAPPGEI
GTSKVEIRPPLVPPCSRPIRCTEGELPHRLQNFGHFSRLSGEAVLRNGTTSSSGHSVRAS
TIVDSNETPVAARVSENVTPVTAMNVRGRELTATSMATTSGGREVTMACELALTASTRGS
GGSVSARAGPPQPSHTEADTAAYDRKRKSRESDDNEGQSEDVEYEFADARKQVRSSTSAK
KSRAAEVHNLSERKRRDRINEKMKALQELIPCCNKSDKASMLDEAIEYLKSLQLQVQMMA
TGCSMVPMMYPGIPQYMPTMGMNMSMGMDMKMGRNRPLISYPPLMPGPAMQNAAAAAQMA
PQYPLPAYHLPPFPAPDPSRIPVANQPNSHVGHNISQPRLPNFSDPYYQYFGLQQAQLML
PQNQEVEQLSSSKLNSCIEGSRGNHQSG
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaattactgtgttgttcctgatttcaaaatggatgatgattattatgatattccttct
gctattttcaacaagaaatccacaatagcagatgaagaaatcatggagctagtatggcaa
aatggtggagtaattatgcaaagccaaaatcaaagatctgtaaggaaatctaaccttttt
cccgagcaatcagctgtagaacaaacggtagcagtttcagctccactgtatatgcaagag
gatgaaatgaactcatggcttcaatctccacttgatgattcctccttcgatgattttcta
aatactacaccgagttgtgacgccgtgacctccgccgctgcagcaccgccgggagaaatt
ggtacttcgaaggtggagatccgtccgcctctggttccgccgtgttcgcggccgattaga
tgtacagagggtgaattaccacatcgattacagaattttgggcatttttcacggttgtct
ggtgaagcggttttacgaaatggtactacatcgagttctggtcactcagttagggcatcg
acgattgtggattcaaacgagactccggtagcagcacgcgtatcagaaaatgtaacacca
gttaccgccatgaatgtcagaggaagagaactgacggcgacgtcgatggcgacaacaagc
ggcggtagggaagtgacgatggcatgcgagttggcattgacagcatctacacgtggttca
ggaggtagtgtaagcgccagagcaggaccgccacagccgtcgcatacggaggcggatacg
gcggcgtatgatcggaaacggaaaagtagagaatcggacgacaatgaaggtcagagtgag
gatgttgaatatgagtttgctgatgcaaggaagcaagtaagaagttctacatcggcaaag
aaatctcgcgcagcagaggtccataatctttctgaaaggaaacgccgagacagaataaat
gagaagatgaaggctctacaagaactcataccttgctgcaataagtcagacaaagcttca
atgctggatgaagcaattgagtaccttaaatcattgcaattgcaagtacagatgatggcc
acgggatgcagcatggttcctatgatgtatcctggaatcccgcaatacatgccaactatg
ggaatgaatatgagcatggggatggatatgaaaatgggcaggaaccggccattaatttca
tatccaccgctaatgccaggtccagcaatgcagaatgcagctgcagcagcacaaatggct
cctcaatatcctcttccggcatatcacttgccaccatttcctgcacctgatccatccaga
atcccagttgcgaaccagccaaactcacatgttggacataatattagtcagccaagactt
cccaattttagtgacccatactatcaatattttggtctacagcaagcacaactgatgtta
ccccagaatcaggaagtggaacagctgagcagcagtaaacttaacagctgcatagaagga
agtagagggaatcatcaatctggttga
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