Solanum lycopersicum (tomato): 101264668
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Entry
101264668 CDS
T02665
Name
(RefSeq) transcription factor PIF1 isoform X1
KO
K16189
phytochrome-interacting factor
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
101264668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sly03000
]
101264668
Transcription factors [BR:
sly03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
101264668
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
101264668
NCBI-ProteinID:
XP_004247109
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Position
9:complement(57709455..57719872)
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AA seq
557 aa
AA seq
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MNHSVPDFDMDDDFSLPASSGITRTKKSAMAEEEIMELLWQNGQVVMQSQNQRSLKKPHI
GNGSGGGGDAVIPSDQAVSREIRHVEETTPHHLFMQEDEMASWLHYPLDDPSFERDLYSD
LLYPTPTSTFTTAALPRENRTSTFEIRPPPPQPSPAAPIGTAPRPPIPPSRRTVTENSNR
FQNFGHFSRLPKARLEPGQANLSKSPRDSTVVDSNVTPITGQESRVTLIPDNVVAVPGGN
VGCSTVNGSTGTATASTAIREPTTTCDISMTSSPGGSGNSVSASAEPPAPAPAPSHKGAA
PTATAAADDRKRKGREMEDEGQNEDAEFESPDTKKQARGSTSTKRSRAAEVHNLSERRRR
DRINEKMKALQELIPRCNKTDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMYPGMQPY
MPPMGMGMGMGMGMDIGMNRPMVPYPPLLPGTAMQNAAAAAQMGPRFSIPQFHLPPVPVP
DPSRMQASSQPDPMLNSLVSHNSNQPRLPNFSDPYQQFFGLQQAQVALPQNQAVEQPSNS
KSGSSKEVGNPGNHQSG
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgaatcattctgttcctgattttgatatggatgatgacttctctcttcctgcttcttct
ggtattaccagaactaagaagtccgcaatggcggaagaggaaatcatggaactactgtgg
caaaatggtcaagtggttatgcagagtcaaaatcaaagatctcttaagaaacctcacatc
ggtaacggcagtggaggtggtggtgatgcggttattccctctgaccaagctgtcagtaga
gagatccgtcatgtagaggaaactactccacatcatctgtttatgcaggaggacgagatg
gcctcgtggcttcattacccactcgatgacccctccttcgaacgtgatctctactccgat
ctcctatatcccacgcccacttctaccttcaccaccgccgcgctgccacgagaaaaccgt
acgtctacgtttgagatccgtccacctccgccacaaccatcgcctgcagcgccgatcgga
acggctcctcgaccgcctatacctccttctaggcgcaccgtcacagaaaattcaaatcga
ttccagaacttcggacacttctcgcgattgcctaaagcaaggctagaacctggtcaggct
aacttaagcaagtcaccaagagattcaacggtcgtggattcaaacgtaactccaattaca
gggcaggaatctagagttacactcatacctgataatgtggtagcagtacccggcggaaat
gtaggatgtagtacagtaaacggcagcaccggaactgcgacagcgtcaacggcaattagg
gaaccgacgactacatgtgatatttcaatgacgtcatctccgggtggctcaggaaatagt
gtaagcgccagtgccgaaccaccagcaccagcaccagcaccgtcgcataagggggcggca
ccaacggcaacggcagcagcggatgatcggaaacggaaagggagagaaatggaggacgaa
ggtcagaatgaggatgctgaatttgagtctcctgatacgaaaaagcaagcacgcggttca
acatccacaaagagatctcgtgctgcggaggtccataatctttcagaaaggagacgtaga
gacagaataaatgagaagatgaaggccctgcaggaactcataccacgctgtaacaagacg
gacaaagcttcaatgcttgatgaggcaattgagtatttgaaatcactacaattgcaagtg
cagatgatgtccatgggatgtggcatggtcccgatgatgtatcctggaatgcagccgtac
atgccgccaatgggaatgggcatgggtatggggatggggatggatattggcatgaacagg
ccaatggtgccatatccacctctattaccaggtacagcgatgcagaatgcagctgcagca
gcacaaatgggtcctagattttctatccctcaatttcatttgccaccagttccagtacca
gatccatccagaatgcaagcctcaagtcagccagatccaatgctaaattcacttgtttca
cataattcgaaccagccaagacttccgaattttagtgatccatatcagcagttttttggt
ctccagcaagcgcaagttgcattaccgcagaatcaggcagtagaacagcccagtaatagt
aaatccggcagcagcaaagaagttggaaatccaggcaatcatcaatctggttaa
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