Solanum lycopersicum (tomato): 101267855
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Entry
101267855 CDS
T02665
Name
(RefSeq) probable DNA helicase MCM9 isoform X1
KO
K10738
DNA helicase MCM9 [EC:
5.6.2.4
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sly03032
]
101267855
03400 DNA repair and recombination proteins [BR:
sly03400
]
101267855
Enzymes [BR:
sly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
101267855
DNA replication proteins [BR:
sly03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
101267855
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
101267855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
MCM_OB
MCM_lid
Mg_chelatase
AAA_5
MCM_N
AAA
AAA_22
AAA_16
FtsK_SpoIIIE
VapE-like_dom
DUF7129
AAA_7
Motif
Other DBs
NCBI-GeneID:
101267855
NCBI-ProteinID:
XP_004231355
LinkDB
All DBs
Position
1:89694106..89706363
Genome browser
AA seq
662 aa
AA seq
DB search
MEGNVHSKELAAYLLSHHSEQLSSIILATDPRLHYSLYVDFAEIMDDNPALSQFIFAKPA
EYLPLFNEAAVWAQKVILADLKQCEDASVKDKVHIRINISGSPLECPETFPSIGRVRVKH
HGILLTIKGTVIRSGAVKMIEGERIYECRRCKHRFKVYPEVETRNSIPKPIFCPSQRSQI
CESTSFQLVEDNKICHDYQEIKIQESIQVLGIGAIPRSVPVILKDDLVDMVKAGDDVIVT
GILTAKWSTDLKDVRCDLDPVLIANHVRRMNELKSEIDIPDDAVLKFKQFWTEFKDTPLK
GRNAILQGICPQVFGLFTVKLAVALTLIGGVQHVDASGTKVRGESHLLLVGDPGTGKSQF
LKFAAKLSNRSVITTGLGSTSAGLTVTAVKDGGEWMLEAGALVLADGGLCCIDEFDSMRG
HDRATIHEAMEQQTISVAKAGLVTTLSTRTIVFGATNPKGHYDPEQPLSVNTTLSGPLLS
RFDIVLVLLDTKNPDWDAVVSSHILAEAETKNHNYEENLGTIWPISMLRRYIQFVKRCFR
PVLTKEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAIT
AILCIESSMTTSAIVDSMGNALHSNFAENPDQEYAKQERLILERLHLLDEFAQVIGTGGS
IC
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggagggaaacgttcacagcaaagaactggcggcgtatttgttaagccatcactccgag
cagcttagttccatcattctggctactgatcctcgacttcactattccctatatgtcgat
tttgcagagataatggatgacaatccagccctttctcagttcattttcgctaaacccgcc
gagtatttaccgctttttaatgaagctgccgtttgggctcagaaagttattttggctgat
cttaaacaatgtgaagacgcaagtgttaaggacaaagtacatattcgtataaatatcagt
ggctctcctcttgaatgccctgaaacttttcccagcattggccgtgttagggtgaagcat
catgggattcttcttactatcaaagggactgtgatcaggtctggagcagtgaagatgatt
gaaggggaaaggatatatgagtgtcggcgatgtaagcacaggttcaaggtttacccggag
gtggaaacaagaaattcaattccaaaaccaattttttgtccctcacagaggtctcaaatt
tgtgagagcacaagttttcagcttgtagaagacaataagatctgtcatgattatcaggag
attaaaatacaagaaagtatccaagttttgggtattggggctattcctcgctcggttcct
gtcattctgaaggatgatcttgttgacatggttaaagcaggagatgatgtgattgttact
gggatcttaactgccaaatggtccactgatttaaaagacgttcgatgtgaccttgatccg
gtactaattgccaaccatgtaaggagaatgaatgagctgaagtcagaaatagatatcccc
gatgatgctgttctcaaattcaagcagttttggactgaattcaaagatactcctctaaag
ggtaggaatgcgattctacaaggtatttgcccacaggtctttgggcttttcactgttaag
cttgcagtggcattgacgcttattggaggtgtccaacatgttgatgcttctggaacaaaa
gttagaggagagtctcatttgcttctcgttggtgatcctggcactggaaagtcacaattt
ctgaagtttgctgctaaattgagcaatagatctgtcattacgactgggttgggaagcact
agtgctggattgactgttaccgcagtaaaagatggaggagagtggatgttagaagctggt
gcccttgtattagcagatggtggtctctgttgcattgatgagtttgacagcatgagaggg
cacgacagagcaaccatccatgaggcaatggagcagcagactataagtgttgcaaaggct
ggtcttgtgacaactctcagtacaaggacaattgtttttggagcaactaaccccaagggg
cattatgatcctgagcagcctttatctgttaatacgacactctctggcccgctgctgagc
agatttgacatagtcctagttctcttagacaccaaaaacccagactgggatgctgttgtt
tcttcacacattcttgctgaggcagaaaccaagaaccacaattatgaagagaatctaggg
actatctggccaatttcaatgctcagaaggtacatccaatttgtgaagagatgctttaga
ccagtcctcacaaaggaggcagaaaaggttatctcaagctattaccaactgcaaagaaga
tctgcgactcaaaatgcagcaagaacaactgtgcgcatgctggagagtctgataagactt
gcccaggcacatgcaagattgatgtttagaaatgaggtcacgagattggatgccatcact
gccatcttatgcattgagtcatccatgactacctcggctatagtggatagcatggggaac
gcattgcactccaattttgcagaaaatcctgaccaagaatatgccaaacaagaaagactg
atccttgagaggctgcatctcctagacgaattcgctcaagtaatcggtactggaggatca
atatgctga
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