Serratia marcescens subsp. marcescens Db11: SMDB11_0120
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Entry
SMDB11_0120 CDS
T03985
Name
(GenBank) radical SAM superfamily protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00790
Folate biosynthesis
smac01100
Metabolic pathways
Module
smac_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
SMDB11_0120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smac03016
]
SMDB11_0120
Enzymes [BR:
smac01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
SMDB11_0120
Transfer RNA biogenesis [BR:
smac03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SMDB11_0120
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
CDG10715
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All DBs
Position
142667..143338
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AA seq
223 aa
AA seq
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MQYPINEMFQTLQGEGFFTGVPAIFIRLQGCPVGCSWCDTKHTWEKEAHREVDLQRILVK
TEESDAWGNASAEQLLAVMRQQGYTARHVVITGGEPCIYDLAPLTELFEQHGYRCQIETS
GTHEIRCSANTWVTVSPKVNMRGGMKVLAQALRRADEVKHPVARERDIEALDALLATLQD
DKARIIALQPISQKEEATRLCIETCIARNWRLSMQTHKYLNIA
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacccgatcaacgagatgttccaaaccttgcagggcgaaggctttttcaccggc
gtgccggccattttcatccgcctgcagggctgcccggtagggtgcagttggtgcgatacc
aaacatacctgggaaaaggaagcccatcgggaagtcgacctgcaacggatcctggtcaaa
acagaagagagcgacgcctggggcaatgccagcgccgagcagctgttggcggtgatgcgc
caacaaggctacaccgcgcgtcatgtggtgatcaccggcggcgaaccctgcatttacgat
ctggcgccgctgaccgagctgttcgaacagcacggctaccgttgccagattgagaccagc
ggcacccacgaaattcgctgctccgccaacacctgggtgacggtttcgcccaaggtgaat
atgcgcggcggcatgaaggtgctggctcaggcgctgcggcgcgctgacgaggtgaagcat
ccggtggcgcgcgagcgcgacatcgaggcgctggatgcgctgctggcgacgttgcaggat
gacaaggcgcggattatcgcgctgcaaccgatcagccagaaagaagaggcgacccgcctg
tgcatcgaaacctgcattgcgcgcaattggcggctgtcgatgcagacccacaaatatctg
aatatcgcctga
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