Serratia marcescens SM39: SM39_0081
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Entry
SM39_0081 CDS
T03592
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
smar
Serratia marcescens SM39
Pathway
smar00540
Lipopolysaccharide biosynthesis
smar01100
Metabolic pathways
Module
smar_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
smar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SM39_0081 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
smar01005
]
SM39_0081 (lpxC)
Enzymes [BR:
smar01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
SM39_0081 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
smar01005
]
Lipid A
SM39_0081 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
BAO32151
UniProt:
A0AAT9EFM3
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All DBs
Position
98573..99490
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AA seq
305 aa
AA seq
DB search
MIKQRTLKRIVQATGVGLHTGKKVTLTMRPAPANTGVIYRRTDLNPPVDFPADAKSVRDT
MLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVDAAEIPIMDGSASPFVFLLLDAGI
EELNSAKKFLRLKETVRVEDGDKWAELSPHNGFRLDFTIDFNHPAIDASSQRYRLDFSAE
SFVRQISRARTFGFMRDIEYLQSRGLALGGSFDCAIVVDDYRVLNEDGLRFEDEFVRHKM
LDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVLAKQEAWEYVTFQDEAEMPLAFKAP
STVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaaaggacattaaaacgtattgttcaggcgactggcgtcggtttgcatacc
ggcaagaaagtcacgctgacaatgcgcccagcgccggctaataccggggtcatctatcgt
cgcactgacttgaatccaccggttgattttccggctgatgcaaaatccgtgcgtgatacc
atgctctgtacttgcctggtgaatgagcatgacgtgcgtatttcgaccgttgagcacctc
aacgccgcgctggctgggttgggcatcgacaacatcgtcatcgaagtcgacgccgctgaa
atcccaatcatggacggcagcgccagtccgttcgtgttcttgctgctggatgccggcatc
gaagaactgaactcggcgaagaaattcctgcgtctgaaagagaccgtgcgtgttgaagat
ggcgacaaatgggccgagctgtccccgcataacgggttccgcctggacttcaccatcgac
ttcaaccacccggctatcgacgccagctctcagcgctatcgtcttgatttctcggctgag
tcgttcgtgcgtcaaatcagccgcgcgcgcaccttcgggttcatgcgcgacatcgaatac
ctgcagtcccgcggcctggccctgggtggcagcttcgactgcgccatcgtggtggatgac
taccgcgtgctgaacgaagacggcctgcgtttcgaagacgaattcgtacgtcacaaaatg
ctggacgccatcggcgacctgttcatgtgcggccacaacatcattggcgcgtttaccgcg
tacaagtctggccacgcgttgaacaacaaactgctgcaggccgtgctggccaagcaggaa
gcgtgggaatacgtgaccttccaggacgaagccgaaatgccattggcattcaaggcaccg
tctaccgtattggcgtaa
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