Serratia marcescens SM39: SM39_0449
Help
Entry
SM39_0449 CDS
T03592
Symbol
sdeX
Name
(GenBank) multidrug efflux pump SdeX
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
smar
Serratia marcescens SM39
Pathway
smar01501
beta-Lactam resistance
smar01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
smar00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SM39_0449 (sdeX)
01503 Cationic antimicrobial peptide (CAMP) resistance
SM39_0449 (sdeX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smar03036
]
SM39_0449 (sdeX)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smar02000
]
SM39_0449 (sdeX)
01504 Antimicrobial resistance genes [BR:
smar01504
]
SM39_0449 (sdeX)
Chromosome and associated proteins [BR:
smar03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SM39_0449 (sdeX)
Transporters [BR:
smar02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SM39_0449 (sdeX)
Antimicrobial resistance genes [BR:
smar01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SM39_0449 (sdeX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
RND-MFP_C
YknX_C
HH_CzcB
Beta-barrel_RND_2
BSH_CusB
BSH_CzcB
HH_AAEA_pHBA
HH_EMRA
HH_YBHG
TPR_8
Motif
Other DBs
NCBI-ProteinID:
BAO32513
LinkDB
All DBs
Position
complement(469815..471002)
Genome browser
AA seq
395 aa
AA seq
DB search
MNKNRGLTPLAAVLMLSGSLVLTGCNDKETQQQGAQQQAPEVGVVTLKAEPLNITTDLPG
RTAAYRIAEVRPQVSGIILKRNFVEGSDIKAGTSLYQIDPATYQASYDSAKGDLAKAQAS
ASIARVTVNRYKPLLGTSYISKQDYDNAVSTLQQADAAVVAAKAAVETARINLAYTKVTS
PISGRIGKSAVTEGALVSNGQATALSTVQQLDPMYVDVTQSSTDFLRLKQELASGALKQE
NGKAKVKLLLENGTEYAQEGTLEFSDVTVDETTGSITIRALFPNPNDTLLPGMFVRARLD
EGVRSDALLVPQQGVTRNPRGEATALVVGADDKVELRTLKADQAIGDKWLVTDGLKAGDR
VIVSGLMKVHPGAQVKVQEVDTQAQKQPQSEAQKS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaacagagggttaacgcctctggcggccgttctgatgctttcaggcagctta
gtgctaacaggatgtaacgataaagaaacccaacagcaaggcgcccaacaacaggcgcct
gaagtgggcgtagtcaccttgaaggccgagcctctcaacatcactaccgatcttcctggc
cgcaccgctgcgtatcgtatcgccgaagttcgccctcaggtcagcggcatcatcctgaag
cgcaacttcgttgaaggcagcgatatcaaggccgggacgtctctgtaccaaatcgatccc
gccacctatcaagccagctacgacagcgcgaaaggcgatttggccaaagcacaggccagc
gcttccatcgcacgcgtgacggtaaaccgctacaagccattgctgggtaccagctacatc
agcaagcaggactacgacaacgccgtctccaccctgcagcaggcggatgccgccgtggtg
gccgccaaggccgccgtggaaaccgcgcgcatcaacctggcgtacaccaaggtgacctcc
ccgatctccggccgcatcggcaagtccgccgtgaccgaaggcgcgctggtcagcaacggc
caggcgaccgccctgtccaccgtgcagcagctggatccgatgtatgtcgacgtcacccag
tcgagcaccgacttcctgcgcctgaagcaagagttggccagcggcgcgctgaagcaggaa
aacggcaaggctaaagtgaaactgctgttggaaaacggcaccgaatacgcgcaggaaggc
acgctggaattctccgacgtcaccgtcgacgagaccaccggctccatcaccattcgcgcc
ctgttccctaacccgaacgatacgctgctgccgggcatgttcgtgcgcgcccgtctggac
gaaggcgtgcgcagcgatgcgctgctggtgcctcagcaaggcgtcacccgcaacccgcgc
ggcgaagcgacggcgttggtggttggggcagacgacaaagttgagctgcgcacgctgaag
gcggaccaggcgattggcgacaaatggctggttaccgatggcctgaaagccggcgatcgc
gtgatcgtctccggcctgatgaaagtgcatccgggcgcgcaggtaaaagtgcaggaagtt
gacactcaggcgcaaaaacagccgcagtctgaagcgcagaagtcataa
DBGET
integrated database retrieval system
