Serratia marcescens SM39: SM39_1110
Help
Entry
SM39_1110 CDS
T03592
Symbol
rumB
Name
(GenBank) 23S rRNA m(5)U747 methyltransferase
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
smar
Serratia marcescens SM39
Brite
KEGG Orthology (KO) [BR:
smar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smar03009
]
SM39_1110 (rumB)
Enzymes [BR:
smar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
SM39_1110 (rumB)
Ribosome biogenesis [BR:
smar03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SM39_1110 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_15
Methyltransf_12
Methyltransf_11
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
BAO33158
UniProt:
A0AAT9E6Z2
LinkDB
All DBs
Position
1134976..1136103
Genome browser
AA seq
375 aa
AA seq
DB search
MHCALYTAGTCRSCQWLEKPYPQQLADKQHHLHSLLAGRDVAQWLQPVAGELSAFRNKAK
MVVSGSVERPLLGMLHRDGTPADLSGCPLYPAGFAPMFAVLKSFIARAGLTPYNVARKRG
ELKYLLLTESTLDGGVMLRFVLRSETKLAQLRAALPWLQQQLPQFKVISANIQPVHMAIM
EGEREIALTEQQALEERFNQVPLFIRPQSFFQTNPQVAADLYATARDWVRALGIDSMWDL
FCGVGGFGLHCAQPQTRLTGIEISAEAIACARQSAQRLGLLHVDFQALDSTRFATAEGQV
PQLVLVNPPRRGIGQALCDYLSRMAPGYILYSSCNAESMAKDIEMLPGYRIERVQLFDMF
PHTAHYEVLTLLVRR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgctttgtatacggcgggcacctgccgttcctgtcagtggctggaaaagccc
tatccgcagcaactggccgacaaacagcaccacctgcactcgctgctggccgggcgcgac
gtcgcgcagtggctgcagccggtggcgggggaactgagcgcatttcgcaataaagccaag
atggtggtcagcggcagcgtggagcgcccgctgctcggcatgctgcaccgcgacggcaca
ccggccgatctgagcggctgcccgctgtaccctgccggttttgcgccgatgttcgcggtg
ctgaaaagctttatcgcccgcgcgggcctgacgccgtacaacgtggcacgcaaacgcggc
gagctgaagtacctgctgctgaccgaaagcacgctcgacggcggcgtgatgctgcgcttc
gtgctgcgctcggaaaccaagctggcgcagctgcgcgccgcgctgccgtggctgcagcag
cagctgccgcagttcaaggtgatctccgccaatattcagccggtgcacatggcgatcatg
gaaggggagcgcgagattgcgctgaccgaacagcaggcgctggaggagcggttcaatcag
gtgccgctgtttatccgcccgcaaagcttcttccagaccaacccgcaggtggccgccgat
ctgtatgccaccgcccgcgactgggtgcgcgcgctgggtatcgacagcatgtgggatctg
ttctgcggcgtcggcggtttcggcctgcactgcgcgcagccgcaaacgcggctgaccggc
atcgagatcagcgcggaagcgatcgcctgcgcgcgccagtcggcgcagcggttagggttg
ttgcacgtagattttcaggcgctcgattccacccgtttcgccaccgccgaaggccaggtg
ccgcagctggtgctggtcaatccgccgcggcgcggcatcggccaggcgctgtgcgactac
ctgagccggatggcgccgggctatattctctattccagctgcaacgccgagagcatggcg
aaagatatcgagatgttgccggggtaccgcatcgaacgggtgcagctgttcgacatgttc
ccgcataccgcgcactacgaagtgctgacgctgttggtgcggcgttaa
DBGET
integrated database retrieval system
