Scophthalmus maximus (turbot): 118283591
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Entry
118283591 CDS
T09850
Symbol
trpc5a
Name
(RefSeq) short transient receptor potential channel 5a isoform X1
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smau01009
]
118283591 (trpc5a)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smau04040
]
118283591 (trpc5a)
Protein phosphatases and associated proteins [BR:
smau01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118283591 (trpc5a)
Ion channels [BR:
smau04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118283591 (trpc5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_5
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
118283591
NCBI-ProteinID:
XP_035461629
LinkDB
All DBs
Position
12:complement(8696747..8771235)
Genome browser
AA seq
1084 aa
AA seq
DB search
MNPMTQLYYKKATYSPYRDRIPLQIVRAEVELSAEERAYLTAVEKGDYAGVKHALREAEV
YYNMDVNCLDPLGRSALLIAIENENLEIMELLLDHGIHTGDALLYAIRKEVVGAVELLLS
HRRPSGEKQVPSLMMDSQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKRFAKDLLDQARSSRELETILNHRDNDQSEELDPRQCHDLAKLKLAIKY
HQKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCVIIGLLFPFFSLIYLLAPKSAL
GGFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNLHMQGPPPTIVEWMILPWVLGFIW
AEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTL
IAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASEEPSNCKGIRCERQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIVPSPKSIWYLLMWLHNKLCRRGPAPGEESHKCGNLREFTERHADSLIQNQHYQ
EVIRSLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRRPPRRHYSSS
SEATRDEGAMASEDDSESGDGGGGVGGQRSRGVTFMTPPEDDPRQALGVSALVRSISGMT
RAESGGEGEEGELQESIGWGQEEEEEEEGKPKSNGLKTTVVPPSSTSILPSPSSSFSSSF
SSSLSRTRSRLQRLSAPGAKTDSFKRLSYMFSRSKRKAPAMPLPLQSPPSYTISDGLLRP
LGSHSHADLGLSDVTRSEIHLNEVGRSVDIGNPSFSPRRTNGRDSLLALPLPPPCPCQSL
HCASNMSESSSRLLDSSEDVFLGGAGEGHVGGGGVMVMGGWVGPCNDVIEDSCEVIEDSV
TTQL
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatgacacagttgtactacaagaaggcgacgtactcgccgtaccgcgaccgc
atcccgctgcagatcgtccgggccgaggtggagctgtctgcagaggagcgggcgtatctc
acggccgtggagaaaggcgactatgcgggcgtcaagcacgcgctgcgcgaggcggaggtc
tactacaacatggacgtgaactgcctggacccgctgggccgcagcgcgctgctcatcgcc
atcgagaacgagaacctggagatcatggagctgctgctcgaccacggcatccacacgggc
gacgccctgctctacgccatccgcaaggaggtggtgggcgccgtggagctgctgctgtcg
caccgcaggcccagcggcgagaagcaggttccctcgctgatgatggacagtcagttctcc
gagttcaccccggacattactcccatcatgctcgccgctcacaccaacaactacgagatc
atcaagctgctcgtccagcggaaggtcaccattcccaggccgcaccagatacgatgtgac
tgcgtcgagtgcgtctccagctcagaggtggacagccttcggcattcgcggtctcgactc
aacatctacaaggctctggcctcgccgtccctcatcgcgctgtccagcgaggaccccatc
ctcacggccttccggctgggctgggagctcaaggagctcagcaaggtggagaacgagttc
cgtcaggagtacgaggagttgtcccagcagtgcaagcgcttcgccaaagacctcctggac
caggccaggagctccagagagctggagaccatcctgaaccacagggacaacgaccagagc
gaggaactggacccccggcagtgtcatgacctggccaagctcaagctggccatcaaatac
caccagaaagagttcgtggctcagccgaactgccagcagctgctcgccacgctgtggtac
gacggcttcccgggctggaggaggcgacactgggccgtcaaactggtcacgtgcgtcatc
atcggactcctgttccccttcttctcactgatctacctgttggcgccgaagagcgcgctg
ggcggcttcatcaagaagcccttcatcaagttcatctgccacacggcgtcctacctgacc
ttcctcttcctgctgctgctggcgtcgcagcacatcgcccgcaccaacctgcacatgcag
gggccgccgcccaccatcgtggagtggatgatcctgccctgggtgctcgggttcatctgg
gcggagatcaaggagatgtgggacgggggattcacagagtacatccacgactggtggaac
ctgatggactttgccatgaactccctctacctcgccacgatatcgctgaagatcgtggcc
tacgtcaagtacaactcctctcgtcccagggaggagtgggagatgtggcacccgacgctg
atcgccgaggccctgttcgccatcgccaacatcttcagctcgctcaggctcatctcgctg
ttcaccgccaactctcacctggggccgctgcagatctcgctgggcaggatgctgctggac
atcctcaagttcctcttcatctactgtctggtgctgctggcgttcgccaacggtctgaac
cagttgtacttctactacgagaccaaggcgtcggaggagccgagcaactgcaaggggatc
cgctgcgagcggcagaacaacgccttctcaacgttgttcgagacgctccagtctctcttc
tggtcgatcttcggcctcctcaacttgtacgtgaccaacgtgaaggcccgccacgagttc
accgagttcgtgggcgccaccatgttcgggacgtacaacgtcatctcgctggtggtgctg
ctcaacatgctcatcgccatgatgaacaactcctaccagctcatcgccgaccacgccgac
atcgagtggaagttcgcccgcaccaagctgtggatgagctacttcgacgagggcgggacg
ctgccgccgcccttcaacatcgtcccgagccccaagtccatctggtacctgctcatgtgg
ctgcacaacaagctgtgccgcaggggcccggcgcccggcgaggagtcgcacaagtgtggc
aacctccgggagttcacggaacgtcacgctgacagtctgatacagaaccagcattaccag
gaagtgatccggagcctggtgaagagatacgtggcggccatgatacgcagcgccaagacg
gacgagggactgacggaggaaaactttaaggagttgaagcaggacatctccagcttccgc
tacgaggtcctggatctcctcggcaaccgccgtcccccccggcgacactactcctcctcc
agcgaggcgacgagagacgaaggcgccatggcctcggaggacgacagcgaatcgggcgac
ggcggcggtggagttggaggccaaaggtcaaggggcgtgaccttcatgaccccgccggag
gacgacccgaggcaggcgctcggcgtctcggccctggtgcggtccatttctggaatgacc
cgggcggagagtgggggagagggcgaggagggggagctgcaggagagcatcgggtggggg
caggaggaggaggaggaagaggaggggaaaccaaagagcaatgggctgaagacgaccgtc
gtccctccgtcctccaccagcatcctcccctcgccgtcctcgtccttctcctcgtccttc
tcgtcgtcgctctctcgcaccaggagtcgcctgcagcgtctctcggctccgggggcaaag
acggactccttcaagcgcctctcctacatgttctcccgctccaaacgcaaagcgcccgcc
atgccccttcccctccagtccccgccctcctacaccatctcggacgggctgctccgcccc
ctggggagccacagccacgccgacctgggactcagcgacgtgaccagaagcgagatccac
ctgaacgaggtgggccgctcggtcgacatcggcaacccgtcgttctcgccgcggagaacc
aacgggcgggactcgctcctcgcgctgcccctcccgcccccgtgcccctgccaatccctg
cactgtgcttccaacatgtccgagtccagctctcgcctcctggactccagcgaggacgtt
ttcctggggggagcgggcgagggccacgtgggcggcggaggggtgatggtgatgggcggg
tgggtggggccgtgcaacgatgtcatagaggacagctgtgaggtcatagaggactcggtc
accacgcagctatag
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