KEGG   Scophthalmus maximus (turbot): 118285085
Entry
118285085         CDS       T09850                                 
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:smau00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    118285085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:smau03000]
    118285085
   04121 Ubiquitin system [BR:smau04121]
    118285085
   03036 Chromosome and associated proteins [BR:smau03036]
    118285085
Enzymes [BR:smau01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     118285085
Transcription factors [BR:smau03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    118285085
Ubiquitin system [BR:smau04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     118285085
Chromosome and associated proteins [BR:smau03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    118285085
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     118285085
SSDB
Motif
Pfam: PHD_4 zf-CXXC JHD F-box-like Cupin_8 JmjC F-box
Other DBs
NCBI-GeneID: 118285085
NCBI-ProteinID: XP_035464316
LinkDB
Position
20:complement(8512120..8532855)
AA seq 1397 aa
MAQPAETCAESGRRLRSICRRMYDENEDLSDVEEIANIRGFSVEEKLASDSYNANFVHSM
EGKDFNYEYVQREALRVPLIFKEKDGLGIRMPDPEFTVSEIKGLVGSRRSVDVMDVSTQK
GSEMSMAQFVRYYETPEEERDKLFNVISLEFSHTKLENLIKRPTAVDQVDWVDNMWPPDL
KQSQTEATNVISEMKYPKVQRYCLMSVKGCYTDFHIDFGGTSVWYHVFKGQKVFWLVPPT
IHNLALYEDWVLSGKQSDIFLGDRVDGCQRVELKPGYTFFIPSGWIHAVYTPEDTLVFGG
NILHSFNIPMQLTIHEIENRTKVHSKFRFPFYYEICWYVLERYLHCLTKRSYLSLEIRKE
PVLMDYESKANTESPSSDSRSQDMNEDSCENHIREDQGEKSDRVAPEGPCSPDHGRGHHL
KGVLSVDSEDSCNPGSASLDFPKTPSDSPTSESQNKWTHLTEFELSGLRTLVEKLESLPE
NKKCVPEGIDNPQALLEDIKVLLKEHAGDDPKLAITGLPVVYWPKKTIKPRPPNRPKPKM
AASPASAVKLSASRGTSGARRRRTRCRKCEACMRTECGECHFCKDMKKFGGPGRMKQSCI
MRQCIAPVLPHTAVCLVCGEAGKEDTVEDEEEKFNLMLMECSICNEIVHPNCLKVKDSNG
VVNDELPNCWECPKCNHAGKTGKASKQKRGPGFKYASNLPGSLLKEPRLNRDTKEDPDPP
MVATATVVTALTTTSAVKRKAEREEIPKRKDEEPPKKRPPLLSLDATPRPRLEDNPLRKK
RKLFDTNDEPVVVKKKKKLSKPDDPMTPKLLRQIKTEKDYGDEEDEQEDHEEDGFCLDRI
HLKETNEFDDEVQEEDETEEEEVTLKKERDSSAENKAKILLSPLLRTSVAREGDQSSSNS
PRAGPSGGSGDAQERSSAQHKARHQRRRLPNKELSKEFKQEIPNAEDCLSSQNHGSVKAE
DSPANHSRRPVKNEDSVSNQNRKPLKTEDSATNQSRRALKLEEGVASQNRRPLKTEECLA
NQNHRPIKAEPENEGEDQKPRWPLNNGGSDLGDWLRHRGREVNGTPRGYSPLGWNRSTPI
TPICPRPLPCRSPPKCIQMERHVIRPPPISPPPDRLPLNDDEAHVMRREMWMAVFGHLTH
RDLCVGMRVCRTWNRWCCDKRLWKHINLNRCKSITPLMLSGIIRRQPVALDLSWTNISKK
QLSWLINRLPGLRVLLLSGCSWVAVSALCTSSCPLLRTLDVQWVEGLKDAQMRDMLSPPT
DNRPGQLDNRSKLRNVEDLRLAGLDITDTSLRLIIRYMPLLSKLDLSYCNHVTDQSVNIL
TAAGTTTRDSLTDINLSVCNRVTDQSLTYFKRCGSICHIDLRYCKQVTKEGCDQFIAEMS
VSVQFELIEEKLLQKIS
NT seq 4194 nt   +upstreamnt  +downstreamnt
atggctcagcccgcggagacgtgcgccgagtccggccgcaggctgcgctccatctgccgg
aggatgtatgacgaaaacgaggacctgtccgacgtcgaagaaatcgccaacatcagaggt
ttcagtgtggaggagaagctcgccagtgacagttacaatgcaaactttgtccactcgatg
gaggggaaagacttcaattatgaatatgtgcaaagggaggctctcagggtcccactcatc
tttaaagagaaagatggactagggatcagaatgcctgatccagaattcaccgttagtgaa
attaaaggtttagtcggcagtcgtcggtccgtggatgtcatggacgtgagtactcagaaa
ggctctgaaatgagcatggctcagtttgtccgatactacgagacaccagaggaagagcgg
gacaaactcttcaatgtcatcagcctggaattcagccacaccaagctggagaacctcatc
aagcgacccacagcggtggatcaagttgactgggtggacaacatgtggcctcctgacctg
aaacaaagccaaacagaagccaccaatgtaatctcggagatgaagtatcctaaagtgcaa
agatactgtttgatgagtgtgaagggctgctacacagatttccacatcgatttcggggga
acatcagtttggtatcacgtattcaaaggacagaaagttttctggctggtgcctcccacc
attcataaccttgccctgtatgaggactgggtcctgtcaggcaagcagagtgacatcttc
ctgggagacagagttgatggatgccagagggtggagcttaagccaggatacactttcttc
atcccgtctgggtggattcatgccgtctacacccctgaggacacactggtgtttggaggc
aacattctgcacagcttcaacatccctatgcagctcaccatccacgagatagagaacagg
accaaggttcattccaagtttcgtttccccttctactatgagatttgctggtatgtcctg
gagagatacctgcactgcctcaccaagcgctcctacctttctctggagatccgcaaagag
cctgtactaatggactatgagtcaaaggcaaacacagagagcccgtcctctgactcaagg
agccaggacatgaacgaggactcgtgcgagaatcacattagggaggaccagggtgaaaag
tcggacagagttgctccggagggcccctgctctcccgaccacgggaggggccatcacctc
aaaggagttctatccgtcgactccgaggacagctgcaatcccggctctgcttctctagat
ttccccaaaaccccatctgactctccgacctcagagtctcagaataaatggactcatttg
acagagttcgagctgagtggactgaggacgctggtggagaagctggagtcgctccccgaa
aacaagaaatgtgtcccagagggaatagacaatccacaagccctgctggaggacatcaag
gttctcttaaaagaacatgctggtgatgaccccaaattagcgatcactggacttcctgtg
gtgtactggcccaagaaaactataaagcctcggcctcccaatcggccaaaacccaagatg
gcagcctctcctgcgtcagcagtcaagctgtcagcgagtcggggaacatctggtgccagg
agaagaaggacccgctgtcggaagtgtgaggcgtgcatgcggacggaatgcggggagtgt
cacttttgcaaagacatgaagaagtttggcgggccggggcgcatgaagcagtcctgcatc
atgaggcagtgcatcgcacctgtgctgcctcacacagcagtttgtctggtctgtggagag
gccgggaaggaggacaccgtggaggacgaggaagaaaaatttaacctcatgctcatggag
tgctccatctgcaacgagattgttcatccaaactgtctcaaggtcaaagattcaaatgga
gtcgtcaatgatgagttgccaaactgctgggagtgccctaagtgcaaccatgctgggaaa
acagggaaagcctcaaagcaaaaaagggggccagggtttaaatacgcttcaaaccttcct
ggctcactactgaaagaaccgcgcttaaaccgggatacaaaagaggaccctgaccctccc
atggtggccacggcaactgtcgtcactgctttgaccaccacatcggctgtgaagagaaag
gcagagcgggaagaaatcccaaagaggaaagatgaagagcctcccaagaagcgccccccc
ttgctgtctctggatgctacaccccgtccgaggctcgaggacaacccactacggaaaaag
aggaaactttttgacaccaatgatgaacctgttgttgtgaaaaagaagaagaaactttca
aaacctgatgatcccatgacgccaaaactgcttcgtcaaatcaaaacagagaaggattat
ggtgacgaagaagacgagcaggaggatcatgaagaagatggattctgcttggacaggatt
catttgaaggagacaaacgaatttgacgatgaggttcaagaagaggatgagacggaagag
gaagaggtgacactgaaaaaagagagagacagtagtgcagagaacaaagccaagatcttg
ttaagtccgctgctgaggacgtctgtggccagagaaggtgaccagtcgtcctccaactct
cccagagctggaccgagcggtgggtcgggagacgctcaggagaggagctctgcccagcac
aaggctcgccatcagcgcagacgcctccccaacaaagagcttagcaaagagttcaaacag
gagattcccaacgcagaggactgtctgagcagccagaaccacggttcggtgaaggcagag
gacagtccagccaaccacagtcgacggccggtgaagaacgaggactctgtgtccaatcag
aaccgtaaaccactaaaaacagaagactcggccaccaatcagagccgcagggcccttaaa
ctggaggagggtgtggctagtcaaaacagacggccactgaaaacggaggagtgtctggcc
aatcaaaaccacaggccaataaaagctgagcctgagaacgaaggggaggaccagaagccc
agatggcctctcaacaatggcggcagcgacctgggcgactggctgcgacatcgggggcgg
gaggtgaacgggacgccgcggggttactcgccgctcggctggaacaggagcacaccaatc
acgccgatttgcccccggccgctcccctgccgctccccgccaaaatgtatccaaatggag
cgccacgtgatccggccccctcccatcagccccccgcccgacaggctgccgctgaacgac
gacgaagctcacgtgatgcggcgagagatgtggatggctgtgttcggccacctgactcac
agagacctctgtgtcggcatgcgcgtctgcaggacctggaacagatggtgctgtgacaag
aggctttggaagcacatcaacctgaaccgctgtaagtccatcacacctctcatgctgagc
ggcatcatccggagacagccggtcgctctggacctcagctggaccaacatctccaagaag
cagctcagctggctgatcaacagactgccaggtctgcgtgtgctgctgctgtcgggatgc
tcctgggtggccgtctctgctctctgcacgtccagctgtccccttctgcgaactctggac
gttcagtgggtcgagggactgaaagacgcccagatgagggacatgctgtcgcctcccaca
gataacagaccaggtcagttagacaacaggagtaagctccgcaacgtggaggacctgcgt
ctggcggggctggacatcacggacacgtccctgcgcctcatcatccgttacatgcccctg
ttgtccaagctggacctcagctactgcaaccacgtgacggaccagtctgtcaacatcctg
acggccgcagggacgaccaccagagactcgctcactgacatcaacctgtcagtctgtaac
agggtcacagaccagtcgctgacctatttcaagcgctgcggaagcatatgtcatatcgac
ctgcgatactgcaaacaggtgaccaaggaagggtgcgaccagttcatcgcagaaatgtca
gtcagcgtgcagtttgaactgatagaggagaaactgctgcaaaagatcagctag

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