Scophthalmus maximus (turbot): 118285230 Help Entry 118285230         CDS       T09850                                  Symbol traf2b Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism smau  Scophthalmus maximus (turbot) Pathway smau04010   MAPK signaling pathway smau04137   Mitophagy - animal smau04141   Protein processing in endoplasmic reticulum smau04210   Apoptosis smau04217   Necroptosis smau04621   NOD-like receptor signaling pathway smau04622   RIG-I-like receptor signaling pathway smau04920   Adipocytokine signaling pathway smau05132   Salmonella infection smau05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:smau00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     118285230 (traf2b)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     118285230 (traf2b)  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     118285230 (traf2b)   09143 Cell growth and death    04210 Apoptosis     118285230 (traf2b)    04217 Necroptosis     118285230 (traf2b)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     118285230 (traf2b)    04622 RIG-I-like receptor signaling pathway     118285230 (traf2b)   09152 Endocrine system    04920 Adipocytokine signaling pathway     118285230 (traf2b)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     118285230 (traf2b)   09171 Infectious disease: bacterial    05132 Salmonella infection     118285230 (traf2b)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:smau03019]     118285230 (traf2b)    04121 Ubiquitin system [BR:smau04121]     118285230 (traf2b) Enzymes [BR:smau01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      118285230 (traf2b) Messenger RNA biogenesis [BR:smau03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      118285230 (traf2b) Ubiquitin system [BR:smau04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     118285230 (traf2b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-C3HC4_4 zf-C3HC4_2 zf-RING_5 zf-RING_2 zf-RING_6 zf-RING_UBOX zf-C3HC4_5 Sina_ZnF Motif Other DBs NCBI-GeneID:  118285230 NCBI-ProteinID:  XP_035464621 EnsemblRapid:  ENSSMAG00025012106 LinkDB All DBs Position 20:9899652..9912178 Genome browser AA seq 520 aa AA seqDB search MARISMDCVTSLPGIPLSVLSVPMENKYKCQQCLQVLRKPVQAQCGHRFCVHCFRQLTSS GPKPCEACRQEEIYEEPISILNSNEAFPDNAAGREIASLPARCLNQGCSWTGSIKEYEAQ HEGCCEFERVQCDACQASILRSDKCRHSERECEARTLNCKYCKMSFNFKEIKAHDEICLK FPLQCKDCGKKKIPREKFSDHSRICAKSKSACPFSEVGCKFVVDNGKLADHEHSSTMEHL RLLLPMVQSMPRARAEALGPGDWQEDSGLGLYRAPEEGVPVGAGASASTPPVGLEKKVNA LENIVCVLNREVERSSVTLEAFAHQHRLDQEKIENMSNKVRQLERTLTMRDLQLSETEQL MRELQFCTFDGIFVWKISEFSRRRQDAVAGRTPAMFSPAFYSSKYGYKMCLRLYLNGDGT GRGTHLSLFFVVMRGRCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVTSTSFQRPIS EMNIASGCPLFCPLAKLAGKSPYLRDDTIFIKAIVDLTGL NT seq 1563 nt NT seq  +upstreamnt  +downstreamnt atggcccgaatctcaatggactgcgtgacctctctaccggggatccccctcagtgtgctg tcagtgcccatggagaataaatacaaatgtcagcagtgtctccaggtcctgaggaagcct gtccaggctcagtgtggccaccgcttctgtgtacactgcttcaggcagctcaccagttct gggccaaagccttgtgaagcctgccgccaagaggaaatatacgaggagccaatctccatc ctgaacagtaatgaggcttttccagacaatgcagcaggtcgagaaattgcaagtctgccg gccaggtgtttgaaccagggctgcagctggacaggatcaataaaggagtatgaggcgcag catgaaggctgctgtgaatttgagcgggtgcagtgcgacgcctgccaggcctcgatcctg cggtcggacaagtgcagacacagcgagagagaatgtgaggcaagaacgctcaactgcaaa tactgcaagatgtcattcaactttaaagaaattaaggcccacgatgaaatctgcttgaag tttcccttacaatgcaaagactgcggcaagaagaagatcccgagagaaaagttcagcgat cacagccggatctgcgccaagtcaaagagtgcctgtccgttcagcgaagtgggctgcaag tttgtggtggacaatgggaagctcgcagaccatgagcacagcagcaccatggagcacttg cgtctgctgctgcccatggtccagtccatgcctcgggcacgtgcagaggcccttggtccc ggggattggcaggaggactctggtctgggcctgtacagggctcctgaggagggagtccct gtgggcgctggagcctcggcctccacgccgcccgtaggcctggaaaaaaaggtgaacgct ttagaaaacatagtgtgtgtcctgaaccgggaagtggagcgcagctcggttacattggaa gcctttgcacatcagcatcgtttggaccaagaaaagattgaaaacatgtctaacaaagtg cgacagctggagagaacgctgactatgagagacctgcagctgtcggagaccgaacagctg atgagggaactccagttctgcacctttgacgggatattcgtgtggaaaatctcagagttc tcgcgccgcagacaggatgccgtggctggacgaactcctgcgatgttctcacctgcgttt tactccagcaaatacggctacaaaatgtgtctgcggctgtatctgaatggcgacgggacg ggtcggggaacacacctttcgctgttcttcgtcgtcatgaggggccggtgcgacgctctg ctgaagtggccgttcagtcagaaggtgactctaatgctcttggatcaaaataaccgggag cacattatcgacgccttccggccagacgtcacatccacgtccttccagcggccaatcagt gagatgaacatcgccagtgggtgcccgctgttctgtccactggctaaactggctggaaag agcccctatctgagagatgacaccattttcatcaaagccatcgtagacctcacaggctta tag

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