Scophthalmus maximus (turbot): 118285297
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Entry
118285297 CDS
T09850
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04010
MAPK signaling pathway
smau04137
Mitophagy - animal
smau04141
Protein processing in endoplasmic reticulum
smau04210
Apoptosis
smau04217
Necroptosis
smau04621
NOD-like receptor signaling pathway
smau04622
RIG-I-like receptor signaling pathway
smau04920
Adipocytokine signaling pathway
smau05132
Salmonella infection
smau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118285297
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118285297
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118285297
09143 Cell growth and death
04210 Apoptosis
118285297
04217 Necroptosis
118285297
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118285297
04622 RIG-I-like receptor signaling pathway
118285297
09152 Endocrine system
04920 Adipocytokine signaling pathway
118285297
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118285297
09171 Infectious disease: bacterial
05132 Salmonella infection
118285297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118285297
04121 Ubiquitin system [BR:
smau04121
]
118285297
Enzymes [BR:
smau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118285297
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
118285297
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
118285297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
SlyX
zf-RING_4
zf-RING_6
zf-C3HC4_4
ATG16
DUF1664
Motif
Other DBs
NCBI-GeneID:
118285297
NCBI-ProteinID:
XP_035464741
EnsemblRapid:
ENSSMAG00025012428
LinkDB
All DBs
Position
20:14916241..14931612
Genome browser
AA seq
607 aa
AA seq
DB search
MATQEPSPPSSMESNKPGFPKKILGNKLEDKHLCNCCHNILRRPFQAQCGHRFCSYCFNR
AVSNGPQKCSACIKEDIFEDPTSILKQGCAFPDNAVRREVENLSAVCINESCNWKGSIKD
YELTHEGKCEFMIIPCPSCKERIRFNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRFHVVGCDMSVEKEKIHDHERAYA
YEHLNLLLHYIMGMKVSMEGLQPQGLELAGHKLVELQQSLRELEARVSQLSTTSSGPPVQ
GAAAATATASTSTSTSTSSSSSGPHGPPASSPLPPPPTLAPTLSVSTSFTPLPSSVGAAL
ELQLHSEKTKVAELGRRCTELEVKSSTFENVVCVLNREVERFATTMEASNRQHKLDQDKI
EALSNKVRQLERTVGLKDLTVAEMEGRLREMSATTFDGVFVWRISDFAKKRQDAIAGRAP
AMFSPAFYTNKYGYKMCLRIYLNGDGTGRGSHLSLFFVVMRGLSDALLKWPFNQKVTLML
LDQSNREHIIDAFRPDVTSSSFQRPVSEMNIASGCPLFCPLSKLDAKNSYIRDDTIFIKA
IVDLTGL
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggccacacaggaaccttcccctccctcgtccatggagagcaacaagcccggcttcccc
aagaagatcctgggcaacaagctggaggacaagcacctgtgcaactgctgccacaacatc
ctccgacggccatttcaagcgcagtgtggccaccgcttctgctcctactgcttcaacagg
gcagtgagtaatggaccccagaaatgcagcgcctgcattaaagaggatatttttgaggat
cctacgtcgattttgaaacaaggatgtgcttttcctgacaacgcagttcgaagggaggtc
gaaaacctgtccgctgtttgtatcaatgaaagttgcaattggaaaggcagcattaaagac
tacgagctgacccacgaggggaagtgtgagttcatgatcatcccctgcccctcctgcaaa
gaacgaatccgcttcaacgaacaggagcgccataacgaacgagagtgcccggagagaacg
ctcaactgcaagtactgcaaggagccatttcactttaaaaatatcaaggcacacgatgag
atctgtcccaagtacccgatgatctgtgaaggctgcgccaagaagaaaatacccagagag
aagtatgtggaccacattaagttctgcagcaaattcagaacaccgtgtcgatttcacgtc
gtgggatgtgatatgtccgtggagaaggaaaagattcatgaccacgagcgcgcctacgcc
tacgagcacctcaatctgctgctgcactacatcatgggcatgaaggtgagcatggagggc
ctgcagccccagggactggaactcgctggacacaaactggtggaactccaacagtccctc
agggaactcgaggccagagtctcccagctcagcaccacctcctctgggcctcccgtgcag
ggagccgccgccgccaccgccaccgcctccacctccacctccacctccacctcatcctcc
agctctggtccccatggtccacctgcttcatctcctctccccccacctcccactctggcc
cccaccctctccgtgtctacctctttcacacctttgcccagctcggtgggagcggcgctg
gagctccagctccacagcgagaagaccaaagtggccgagctgggacgcaggtgcacggaa
ctggaagtcaaatccagcacgtttgaaaacgtggtgtgcgtgctgaatagagaggtggag
aggttcgccaccaccatggaggccagtaaccgtcagcataagctggaccaggataagatc
gaggctctcagtaataaggtgcgacagctggagaggacagtggggctgaaggacctgacg
gttgctgagatggagggccggctcagggaaatgtctgccaccacctttgacggcgtcttt
gtctggaggatctccgattttgccaaaaagagacaggacgccatcgctggtcgagcccct
gccatgttctcaccagccttctacaccaacaagtatggctacaagatgtgtctgcggatc
tatctgaacggagatgggacggggcgtggcagccacttgtccttgttctttgtggtgatg
aggggactgagtgacgctctgctcaaatggcccttcaaccaaaaggtgacactgatgctg
ctggaccagagcaacagggagcacatcatcgacgccttccgacccgacgtcacgtcctcg
tccttccagagacctgtgagcgagatgaacatcgccagtggctgtccgctcttctgccca
ctctccaagctcgacgccaagaactcttacatccgcgacgacaccattttcatcaaggcg
attgtggacctcaccggcctctag
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integrated database retrieval system