Scophthalmus maximus (turbot): 118286069
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Entry
118286069 CDS
T09850
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04620
Toll-like receptor signaling pathway
smau04621
NOD-like receptor signaling pathway
smau04622
RIG-I-like receptor signaling pathway
smau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
118286069 (traf3)
04621 NOD-like receptor signaling pathway
118286069 (traf3)
04622 RIG-I-like receptor signaling pathway
118286069 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118286069 (traf3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
zf-TRAF_2
Sina_ZnF
CCDC113_CCDC96_CC
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
MctB
Fez1
Crescentin
FlaC_arch
ATG17_like
DUF1664
FapA
Fzo_mitofusin
ATG16
Motif
Other DBs
NCBI-GeneID:
118286069
NCBI-ProteinID:
XP_035466076
UniProt:
A0A8D2ZMA4
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Position
15:complement(97133..105205)
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AA seq
595 aa
AA seq
DB search
MSAGRSADGREVQIPLQQVASSLAAPLSVAPPIIPPSHRPANPWPPSDPAASQGVPAGFL
PLHGGFRDHFVETPEAKYCCEVCRLVLCQPRQTECGHRFCQSCIHNILSQPNPVCPADME
PLFKDKIFRDVCCHREIMALKVYCRSEANGCQEQMSLHQIPDHLNVCPFFEVPCPLGKCK
ERMMRKEIPDHLSWKCKHRETTCEFCITKMPLTDLQKHKETVCPAFPVSCPNHCSFSSLP
RSELSSHQHDCPKAQVSCLFHRYGCSFKGLNQEMRQHESTFAAEHLRMMANRNSLLENKV
EDVKGELLERYKVLPALSSRLSELENQNDELRDKNRQIEQKLATMQKLMSSHSEKLLEVE
LELRSLRLLRDEVENLRGTLEGVRNRLTTLEQGGRSGTGSTTHTLAPLETQLNRHDDMLS
VHEIRLADMDLRFQVLETASYNGTLIWKIRDYKRRKQEAVAAKTLSLYSQPFYTGYFGYK
MCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFK
PDPNSSSFRRPAAEMNIASGCPLFVSQSVLETGSYIKDDTIFIKVTVDTSDLPDP
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcggggaggagtgctgacgggagggaggtgcagattcccctccagcaggtggca
tcctccctggctgctcccctctctgtggcccctcccatcatcccaccctctcaccgccca
gccaatccctggccccccagcgaccctgctgcttcacaaggtgtccctgcaggtttcctg
cctcttcatggaggattcagggatcactttgtagaaactccagaagccaaatactgctgc
gaagtctgtcggctggtcctatgtcagccccgccagaccgagtgtggacaccgcttctgt
cagagctgcatccacaacatcctcagtcagccgaacccagtgtgtccagctgacatggag
ccactgtttaaagacaagatcttcagagatgtttgctgccatcgagagatcatggctctg
aaggtttactgtcgcagtgaagccaacggctgtcaggaacagatgagtctgcaccagata
cctgaccacctgaatgtgtgtcctttctttgaggttccctgtccattgggtaaatgtaaa
gagcggatgatgaggaaagagattcctgaccacctgagctggaaatgtaaacacagagag
accacctgcgagttctgcattaccaagatgcctctgactgacctgcagaaacacaaagag
acggtgtgtccagcgttcccggtgtcctgtccaaaccactgctccttctcctcgctgccc
cggagtgagctgtccagtcaccaacatgactgtcccaaagctcaggtgagctgtctgttc
caccgctacggctgcagcttcaaggggttgaaccaggaaatgaggcaacatgagtcaacc
tttgcagctgagcacctgaggatgatggccaacaggaactcgttgctagagaacaaggtg
gaggatgttaaaggtgagctgttggagcgatacaaggtgcttcctgctctgagcagtcgt
ctgtcagagctggagaaccagaacgacgagctgagagacaagaaccgacaaatagagcag
aaactcgccaccatgcagaagctcatgagctctcactcagagaagctgctggaggtggag
ctggagcttcgttctctccgtctgctcagagacgaggtggagaacctgagaggaacgctg
gagggcgtacggaaccgactgactactctggaacaagggggacgcagtggaacaggatcc
acaacacacactctggcgcccctggaaactcagctgaatcgccacgacgacatgctgagt
gtccacgagatccgactggccgacatggacctgcgtttccaggtgctggagacagcgagc
tacaacgggactttgatctggaagatccgcgattacaagaggcggaaacaggaagctgtg
gcggcaaagacgttgtcgctgtattcgcaaccattttacacaggatactttggatataag
atgtgtgccagagtttacctgaacggagacggaatgggcaaagggactcacctgtcgctg
ttctttgtggtgatgaggggcgagtatgacgccctgctgccctggcccttcaaacagaag
gtgactctgatgctgatggaccagggtccgtccaggaaacacctgggcgacgccttcaaa
ccggatccgaacagcagcagcttcagacgtccggcggccgagatgaacatcgcgtccggt
tgtccgctgttcgtgtctcagagtgtcctggagaccggcagctacatcaaggacgacacc
atcttcatcaaggttaccgtggatacctctgacctccctgacccttga
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