Scophthalmus maximus (turbot): 118286781
Help
Entry
118286781 CDS
T09850
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118286781 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118286781 (c9orf72)
Membrane trafficking [BR:
smau04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
118286781 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
DUF7645
Motif
Other DBs
NCBI-GeneID:
118286781
NCBI-ProteinID:
XP_035467364
LinkDB
All DBs
Position
15:complement(16248004..16265747)
Genome browser
AA seq
462 aa
AA seq
DB search
MSSGCPPQSPAVAKCEVAVEGECPLLAATFAYWDNILGPRVRHIWAPKGDQLMFLSDGEV
TFLANHTLNGEILRSAECGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQT
ELAFYLPLHTICVERLKHVIRKGRIWMQKGYNIISVLSLEIVPIMELLASMKSHSVSEDI
DIRDTVLHDDDIGDSCHEDFLHKAVSSHLQTCGCSIVVGSNPEKVNKIVRTLCLFLTPAE
RKCSRLCRADSSFTYDTGLFVQGLLKDSTGSFVLPFRQVLYSPYPTTHIDVDINTVKQMP
PCHEHMYNQRRYMRSELNTLWKTDSEEDIPPDTVIHTDETFTPDLNIFQDVMHNDTLVKS
FIDEVFMLKPGLSLRSTYLAQFLLLLHRKALTLLKYIEDETQKGKKPFRSLRSLKTDLDL
TVEGDLNIVMAFAEKLRAGLHSFVFGKPFYTSMQERDVLMTL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctggctgtccaccccagtcaccagctgtggccaagtgtgaagtagcggtggag
ggagaatgtccattgctggcggccaccttcgcttactgggacaacatcctgggcccgcgc
gtgcgccacatctgggccccaaagggcgaccagctgatgttcctcagcgacggggaggtc
acctttttggccaaccataccctcaacggggagatcctgcgcagcgccgagtgcggcgcc
gtggacgtgaagttctttgtgctggcagagaagggcgtcatcatcgtgtccctcatcttt
gacggcgagctgaagggggacaagaacacgtgtgccctgtccatcatcctgccccagacc
gagctggccttctacctgcctctgcacacaatctgcgtggagaggctgaaacacgtcatc
cgcaaggggcgcatttggatgcagaagggctacaacatcatctcagtgttgagcctggag
attgtccccatcatggagctgttggcctcgatgaagtcacacagtgtgtcagaggatatc
gatataagagacaccgtgctacatgacgatgacatcggggacagctgccacgaggatttc
ctccacaaggccgtcagctctcatctacagacgtgcggctgttcaatagtggttggaagc
aacccagagaaagtaaacaagattgtgcgaacactctgcctcttcctcaccccggccgag
aggaagtgctctcgcctctgcagggccgactcttccttcacatatgacacgggcctgttt
gttcagggtctgctcaaggactctacgggcagctttgtcctgcccttccgccaggtgctc
tactctccgtacccaaccactcacatcgacgtcgacatcaacacggtgaagcagatgccg
ccgtgtcacgagcacatgtacaaccagcggcgctatatgcggtcggagctgaacacgctc
tggaagacggacagcgaggaggacatacccccggacacagtcattcacactgatgaaacc
ttcacacctgacctgaatatattccaggacgtcatgcataatgacactttggtgaagtca
tttatagacgaggtgttcatgctgaagccgggcctgtccctgcggagcacctacctggcc
cagttcctgctgctgctccacaggaaggccctgacgctgctcaagtacatcgaggacgaa
acgcagaaggggaagaagccgttccgatctctgcgcagcctaaagacggacctggatctg
acggtggaaggggacctgaacattgtaatggccttcgccgagaagctgagggcgggactg
cactcgtttgtgttcgggaagccgttctacaccagcatgcaggagcgagatgtgctcatg
accttgtga
DBGET
integrated database retrieval system
