Scophthalmus maximus (turbot): 118287131
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Entry
118287131 CDS
T09850
Name
(RefSeq) dermatan-sulfate epimerase-like protein
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
smau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
118287131
Enzymes [BR:
smau01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
118287131
BRITE hierarchy
Motif
Pfam:
Sulfotransfer_3
Sulfotransfer_1
DUF4962
Motif
Other DBs
NCBI-GeneID:
118287131
NCBI-ProteinID:
XP_035467858
EnsemblRapid:
ENSSMAG00025018680
LinkDB
All DBs
Position
16:710131..716019
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AA seq
1218 aa
AA seq
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MYSRLPGNMAVNWVVYSVFLLPLLAVGTAFSGVFNATDRDIVTDALLQVKLTQNTGTKQW
NLHSADSHPNLYFNQGEVLHLRQRSSTTHSHIFKVIRAAVLAMLSNVPFYMPPVKHEEFT
SKWNEIYGNNLPPLALYCLLCPEDSAALQFLIKFMDRMAEYPDWKVTSAPNDEVPMAHSL
TGFATAYDFIYSQLDKRRRDVYVKKISSETEQLYELSKYRGWGKQYLQNHQTTNILAILT
GAIVVGSHDNQESMIWKQVAVNYMEKTMFLLNHVVDGSLDEGVAYGSYTAKSITQYVFLA
QRHFNIDNTQNNWLLGHFWFYYATLLPGFQRTVGIADSNYNWFYGPESQLVFLDTFVMRN
GTGNWLAQQIRKHRPKDGPMGQSSAQRWATLHTEFIWYNSHLTLQPPHNFGKARMHIFSN
WGVVTYGAGLPNGQGNTFVSFKSGRIGGRAVYDIVHDKPYSWVDGWNSFNPGHEHPDQNS
FTFAPNGQVFVSEALYGPKYSYLNNVLVFSPSPTSQCNSPWEGQLGECAKWLRWTDEGVG
DARGEVVVASSHRDTLFVSGEAVSAYSPAMRLKSVFRALVLLNSQTLLVLDHVEKWSDSP
VKSFSAFFHNLDIDFKYVPFRYMDKYNGAMMDVWDAHYKMFWFDPQGHSPDTRIQEAEQA
AEFKKRWTQYVNVTFPMTGTVSRVAYVLHGPYVKVFNCRFIDSSKNGVRLSLTINNTEKM
VSIATNYKDIGARLNYLGFGGHCKVEDAYQITRYGLGTQLIPKQISSDNQLFDIGFTVNV
VAGVVLCVAIGFLTMQRKLYACFGMLMRYALLSVLILWIAELLFVSNRCDQLLCGVKWKG
AGARSEINKQIRLYEQHRLPLPTVIITALPGSGSEILKHLFYNNSDFVYIRVPTEHMDIP
ETEFEFDSLVDACEWSRSDAVRGRFKIIQGWLHSLVHNTKLHLQNIQLEEGSRFKQPQRV
APSRDRKKRSRWRELGSELKGKLRAGLDRDAEYIREMRRHVVEYPDARVVLNLRSGSWSL
KLPFIQEVVGQSLRSIYVVRDPRALIHLLLYNRKPSLYSLKNIPQHLSLIFKEDVVRHGC
SSVAPEFNIIQRLLSRSETNPVLILAHLWLAHTTAVLRVSESLPEESYLQVRFEDVVNSP
QETAESIHTFLGVPVSPAALNQLFFTTSTNLFSLMYEGEISPASINMWRQNMSRKDIRLI
EDVCGSVMKRLGYSRLAS
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgtattcaaggctgccaggcaacatggctgttaactgggttgtatattcagttttttta
ctaccacttttggcagtggggactgctttctctggggtcttcaatgccacagacagagac
attgttacagatgccttgctgcaggtcaagctcacacaaaacacagggactaagcaatgg
aatctccactctgctgattcccatccaaacctatattttaaccaaggggaagtgttgcac
ttaaggcagaggtcctctaccacccacagtcacatatttaaagtcatccgggcagctgtg
cttgccatgctgtcgaatgtccccttctacatgccccctgtgaaacacgaggagtttaca
agcaagtggaatgagatttatgggaacaacctgcctcccctggctctctactgcctgttg
tgcccggaggactctgctgccctgcagtttcttatcaagttcatggataggatggctgaa
tatcctgactggaaggtgaccagtgcccccaacgacgaggtccccatggcacactctctc
actgggtttgctactgcttatgactttatttactctcagctagataagcgcagaagagat
gtttacgtcaagaaaattagctctgagacagaacagctgtatgagctctctaagtacaga
ggatgggggaaacagtatctccagaatcatcaaactactaacatattagccatcctgact
ggtgcaatagtggttggatcacatgacaaccaagagtcaatgatatggaaacaagtggca
gtgaactacatggaaaaaactatgtttctcctaaatcatgttgttgatgggtctctggat
gagggagtagcctatgggagctacacagccaagtccataacacagtatgtcttcttagct
cagcgccatttcaacattgacaacacgcagaacaactggcttctggggcacttctggttt
tattatgccactctgttgccaggctttcagagaacagttggcatcgcagactctaactac
aactggttttatgggccagagagccagcttgttttcctcgacacattcgtcatgaggaat
ggaacgggtaactggctggctcagcagattagaaagcaccgacccaaggatggtcccatg
gggcagtcatctgcccagcgttgggctacacttcacacagaattcatctggtacaactct
cacctcacactccagcctccccacaattttggcaaagcaaggatgcatattttctcaaac
tggggcgtggttacctacggagcagggcttcccaatggtcagggcaatacttttgtctcc
tttaagtccggcagaattggtggccgtgcagtctatgacattgtccacgacaagccttac
tcctgggtggatggctggaacagctttaaccctggtcatgagcacccagaccaaaactct
ttcacatttgctcctaatggacaagtatttgtttctgaagcactttacggaccaaagtac
agctatcttaacaatgtcttggtgttcagcccctctcccaccagtcagtgtaacagtcca
tgggagggtcagttgggtgagtgtgctaagtggctgcgctggactgatgaaggtgtgggt
gatgcacgaggggaggtggtggtcgcttcctcacacagggacaccttgtttgtgagtggg
gaggctgtgtcggcatactcccctgcaatgagactaaagagtgtgttcagagccttggtc
ctgctgaactcacagaccctgctggtgcttgaccatgtggagaagtggtctgattcacct
gtgaagtcattcagcgcgtttttccacaatcttgacatcgacttcaaatacgttcctttc
agatatatggacaaatataatggcgcgatgatggacgtgtgggatgctcattataaaatg
ttctggttcgacccccagggtcacagtcctgacacaaggatacaggaggcagagcaggca
gccgagtttaaaaagaggtggactcagtatgtcaacgtcacttttccaatgacagggaca
gtcagcagagtggcttatgttttacatgggccatatgtcaaagtgttcaactgtagattc
atagacagtagcaaaaatggagtgaggctttctttaacaataaataacacagagaagatg
gtctccatagccacaaactataaagacataggggcaaggttgaattatttaggatttgga
ggtcactgtaaagttgaggatgcatatcaaatcacccgatatggccttgggactcaactc
atccccaagcaaatcagcagtgataatcagctgtttgacattggattcacagtcaatgtg
gtagcaggggttgtgctttgtgtggccataggatttctgaccatgcagagaaagttgtat
gcctgcttcggcatgctgatgcgttatgccctgctgtctgtgctcattctgtggatagcc
gagctgctgtttgtgtctaaccgctgcgatcagcttctctgtggggtaaaatggaaaggt
gcgggtgccagaagcgaaataaacaaacaaataagactgtacgagcagcatcgactcccc
ctccccactgtcatcataacagcccttccgggatctggatcagaaatactcaagcacctt
ttctacaacaactcagactttgtgtacataagggttcccactgagcacatggatattcct
gagactgagtttgaatttgactctctagtcgatgcctgcgagtggtcaaggtcagatgct
gtgcgcggacggtttaagattattcagggctggctgcattcactggtccacaacaccaag
ctgcacttgcaaaatattcagctggaggagggcagtaggttcaaacagccccagagagtt
gccccctccagagacagaaagaaaagatccagatggagggagcttgggtctgagctaaag
gggaaactgagggctggtctggacagagatgcagagtacattagagagatgagacgtcat
gttgtggagtaccctgatgcacgggttgttctcaacttgaggagtggaagctggtcgcta
aagctgccctttatacaggaggtcgtgggacaatccttgaggtcaatctacgtggtgaga
gaccctcgggcactgattcatctgttgctttataacagaaaacccagtctttattccctt
aaaaacatcccacagcacctttccttgatatttaaggaggatgttgtcaggcatgggtgc
tcgagtgtggcgccagagtttaacataatccagaggctgctgtcccgttctgagacaaac
ccagtcctgatactggctcatctgtggctggctcacactacagctgtgctgagggtcagt
gagagcctccccgaggagtcgtacctccaagtgaggttcgaggacgtggtcaactccccg
caggagacagcagaaagcatacacacatttctgggggtgcctgtttcacctgcagccctc
aaccaactctttttcaccacctctacgaacttgttcagtcttatgtatgaaggagaaatt
tcaccagccagtattaacatgtggagacagaatatgtctcgaaaggacatcaggctaata
gaggatgtgtgtgggagtgtgatgaagaggctgggttacagcaggttagctagttaa
DBGET
integrated database retrieval system
