KEGG   Scophthalmus maximus (turbot): 118287266
Entry
118287266         CDS       T09850                                 
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau03440  Homologous recombination
smau03460  Fanconi anemia pathway
smau04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:smau00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    118287266
  09124 Replication and repair
   03440 Homologous recombination
    118287266
   03460 Fanconi anemia pathway
    118287266
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:smau01009]
    118287266
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smau04121]
    118287266
   03036 Chromosome and associated proteins [BR:smau03036]
    118287266
   03400 DNA repair and recombination proteins [BR:smau03400]
    118287266
Enzymes [BR:smau01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     118287266
Protein phosphatases and associated proteins [BR:smau01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     118287266
Ubiquitin system [BR:smau04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    118287266
  Multi subunit type E3
   BRCC complex
    118287266
Chromosome and associated proteins [BR:smau03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     118287266
DNA repair and recombination proteins [BR:smau03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     118287266
    BRCA1-A complex
     118287266
    BRCA1-B complex
     118287266
    BRCA1-C complex
     118287266
    BRCA complex
     118287266
   FA (Fanconi anemia) pathway
    Downstream FA components
     118287266
SSDB
Motif
Pfam: BRCT zf-C3HC4 BRCT_2 zf-C3HC4_4 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 RING_XB3-XBAT31 zf-Nse RTT107_BRCT_5 zf-RING_5 zf-RING_4 zf-ANAPC11 zf-MIZ zf-RING_10 zf-PARP PTCB-BRCT TRAF3_RING Baculo_IE-1 YicC-like_C
Other DBs
NCBI-GeneID: 118287266
NCBI-ProteinID: XP_035468172
LinkDB
Position
16:13514052..13534225
AA seq 1420 aa
MKTPKASDVKKEISVLWETLQCPICLDLLTAPVSTKCDHQFCKFCLMKLLDNSKQNRANC
PVCKTKITKRSLQESPGFQRLVAGLQDMIQAYEHDTCTNYFTGISLQEKQSGVTDAEATK
HPHNVSSGDAPVNDLDNVEIAEHDDLPRSYSSTIAAQNGFARLMGLDDSTPLTTENEGLD
SGLGDASPTSNKKIHSSSDNLLPIETELLEAVEEASTHKTRGKIKSGKLENAALHTLEIP
DKTDQQPVRKSSRTKLKNDLDSDKILRRKQKKSLEKVAEWLMKVPTEGSLELEKPDENVD
DSDSCSSTATLDIKQQISDMNPKREDRAKALEEHVFGAVYKRQRSGKRNIPCPPNVSVEP
TTTIKQKTDSEDKIHSDLEEEQPLTNEVNDTSSDISKEAEHMEIMEENEIDEYGEEWNNF
SESDKSKGKVEVPHPLSDFEQQRPEGKLKKSMRIALQRVDSDLQEQFKSKSEITEQKKTD
RRKGKNTSSEKGKPGRSSKPLVLVGVQNGGTSPKTGLRSEEVQVQIENYPSSEDQTTPNM
RSTRRSRRLQLFAEEVQEGHKKANLKARVAEKDSSVVQRSEEVIGGTLDTTQTPKNGNMT
QLAKRNGCIYDEDLGGIENMESGERTHRKQESFAEVPNAESLSEASAACYVPVVPSSASP
TEAAVVDLALESDNLTDEFSKNIELETSACKSKFAITENEEDVVNDSELDTEQLLRSFKA
TKRKSFHLGGPHVKRSRSSDQGNTQGAEAEEKSPSQETLGDNENSLCSDLITQSISPVLT
RKTVDEVVAEGLTSVTRCSDGVGGAGDAGDCFSRNSLSSVLTPNQVSKREMESPHLSVVP
QLVNSGLCFTAAENEELHEASKCSHISNCQLDCSTRDAGERKEIRDSTSAGKQSDHTAEH
VLVAEASLTPDGLVTPVVQMVHETNWNDKGGAEVNGHSSITSNPRKKRRTQRLESSSSSD
GGGSREELPTLAQIFGTSALPAAGTKGRGDSNEANGCEAACVTADAADQVSRPPACPSPD
CVTSSQASVDLFGTPDECIAPVNDNTVSMESSQFSSEVLVTQQKIQMQKELVRLEKLMAL
VSEVLQEKEHSPAKETQQSSKTTGPDTHRPPLCYQDACQDSDQRGVPDAECEHSTGVCDG
KGVAESSVSEHGAIPEKKAQQSTNTALGAKGTEAFKTPDISSAAKTLKNCSSLSDGQEDK
ENNTPPRDRREDKMLLASSGLGPNEQIMVKKFAKRVGARVVSQVTPEVTHIIMRTDEQLV
CERTLKYFLGIAGRKWVVSFQWISECFKLKKVLNESLFEVKGDVVNGPNHQGPSRARTTE
DSNLLMKGYTVCFQGPFTDMTTDEMEWMVELCGATVVKDPLIFDSKQKSHQLAIVQPGPE
SSSSSSTYSSLSRRATVVTRGWLLDTVATYTLQNFNNYSP
NT seq 4263 nt   +upstreamnt  +downstreamnt
atgaaaaccccaaaggcctcagatgtcaaaaaggagatatcagtcctttgggagactctg
caatgtcccatatgcttggatttattgacagcaccggtatctaccaagtgtgaccatcag
ttttgcaaattttgtttaatgaaacttttggacaactctaaacaaaacagggccaactgt
ccagtgtgtaaaaccaagataaccaaaaggagcttgcaggagagccctgggtttcagaga
cttgtcgcgggattgcaggacatgatacaagcttatgaacatgacacctgcacaaattac
ttcactggaatttcactgcaagaaaaacaatcgggcgtcacagatgctgaagctaccaaa
catcctcataatgtgtcatctggagacgcaccagtcaatgaccttgacaacgtggaaatt
gcagagcatgatgatcttcctcggtcctactcttcaactatagcagcccagaatggattt
gcaagactcatgggacttgacgactcaactcctttgacgacagaaaacgaaggcctggac
agcggccttggggacgcctcaccgacttctaacaagaaaatccatagctcttcagataat
ttgctaccaatagaaacagaattgttagaagctgtggaagaggcatcaacgcacaaaact
agaggcaaaattaaatctggtaaattggagaatgctgcccttcatacgcttgagattcca
gacaagactgatcagcaacctgtgagaaagtcctcacgtacgaagctgaaaaacgatttg
gattctgacaagattcttaggcggaagcagaagaaaagtctagagaaagttgctgagtgg
ctcatgaaagtaccaactgaaggaagtctggagttagaaaaaccagacgaaaacgttgat
gactccgacagctgttcctccactgcaacattagacattaagcaacaaataagcgatatg
aatcctaagagggaggatcgggccaaagccctggaagagcatgtgttcggagccgtctac
aaacgacagaggagtggaaagaggaacatcccttgtccacctaatgtttccgttgaacca
acaacaactataaaacagaaaacagactctgaagataaaattcacagtgacttggaggaa
gagcagccattaacaaatgaagtaaatgacaccagcagtgacatttcgaaagaagcagaa
cacatggaaatcatggaggaaaatgaaattgatgaatatggggaagagtggaacaacttt
tcagagagtgacaaaagtaaaggcaaagttgaagttccccatcctttgtctgattttgaa
caacagcgaccagaaggaaagttaaagaaaagtatgcgtatcgccctgcagcgggttgac
agtgatttgcaggaacaatttaagtcaaagtcagaaataactgagcaaaagaaaactgac
aggaggaaaggtaaaaacacaagttcagaaaaaggcaaacctggtagatcgtcgaagccc
cttgttctggttggagttcaaaatggaggaaccagtccaaagactggactgagatcagaa
gaagttcaggtacaaattgagaactatcccagcagcgaagaccaaaccaccccaaacatg
aggagcaccaggagaagcagaaggcttcagctctttgctgaggaagtccaggaaggtcac
aaaaaagcaaacttgaaagccagagtcgctgaaaaggacagcagtgtcgtgcagcgatcg
gaggaggttataggaggaacactggatacaactcaaacacctaaaaatggaaatatgaca
cagttggccaaaagaaatggatgtatttatgatgaagatttaggaggcattgaaaacatg
gagtccggtgagagaactcaccgaaaacaagagtcctttgctgaagtgccaaatgctgaa
tctctgtccgaagccagtgctgcttgttatgtccctgtggtcccaagttctgcaagtcca
actgaagcggctgtggtagatctggcacttgaaagtgacaatctgactgatgaattctca
aaaaatattgagttggaaacttcagcttgcaaatctaaatttgcaataacagaaaatgag
gaagacgttgtcaacgacagcgagctggacacagagcaactgctgaggagcttcaaagcc
actaagaggaaatctttccacctcggtggtccacacgtgaaaagaagccgaagctcggac
caaggaaacacgcagggtgctgaagcggaggaaaaaagcccctcccaggaaacattaggt
gacaatgagaactcattgtgtagcgatttgatcactcagtctatctcaccggtcctgaca
agaaaaacggttgatgaagtggtggccgaaggcttgacgtctgtcaccagatgctcagat
ggcgtcggtggtgctggtgatgctggtgattgtttctccaggaatagtcttagcagtgtc
ctcactcctaatcaagtgtccaaacgtgaaatggaaagtcctcatctctctgtcgtccct
caactagtaaattctggtctctgcttcactgctgctgaaaacgaggaactgcatgaagcc
tcgaagtgctctcacatctcaaactgtcagcttgattgttcaacaagggatgccggggaa
cggaaggagataagagacagcacttctgctggaaagcagtcagaccacacggccgaacat
gtcttagtcgcagaggcttcattaactcccgacggcctggtcacaccagtcgtccaaatg
gtccatgaaacaaactggaacgacaaaggaggcgccgaggtcaacggccattcctccatc
acgagcaacccaaggaagaagaggaggactcagagactggagtcctcgtcctcgtccgat
ggcggcggatccagagaggaattaccaactctggcgcaaatttttggaacgtcagctctt
ccggctgctgggaccaagggtcgaggagactccaatgaagctaatggatgtgaggctgca
tgtgttacagctgatgcagcagaccaggtcagccgcccacctgcgtgccccagccccgac
tgtgtgacatccagccaagcttcagtggacttgtttggcacgccagatgaatgcattgcc
ccagtaaatgacaacaccgtttccatggaatcatcacaattttcaagtgaggtccttgtc
acacagcaaaagatacagatgcagaaggagctggtgaggctggagaagttgatggctctg
gtgtcagaggtgcttcaggagaaggagcacagtcctgcgaaggaaacgcagcagagcagc
aaaaccacaggcccagacactcacagaccccccctgtgttaccaggatgcatgccaagat
tcagaccagagaggtgttccagatgcagagtgtgagcacagcacgggagtgtgtgacggc
aaaggggtcgccgagtccagcgtgtcggagcatggcgctattccagagaagaaagcgcag
caatccacaaacacagcactgggcgcaaaaggcactgaagccttcaagacaccggatata
agttcagcagccaagacgctaaagaactgtagttcactgtcagatgggcaagaagacaaa
gaaaacaatacacctccaagagatagacgtgaagataagatgctgctagcgtcctctgga
ttagggcccaatgaacagataatggtgaaaaagtttgccaagcgagtcggtgcccgtgtg
gtttcccaggtcacaccagaggtgactcatatcatcatgcgcactgatgaacagctggta
tgtgagcgcacgctcaagtacttccttggcatcgcaggcaggaagtgggtcgtgagtttc
cagtggatttcagagtgcttcaaactaaagaaagtcctcaatgagagtctctttgaagtg
aaaggcgatgtggtgaacggacccaaccaccagggcccctccagagctcgcacgactgaa
gacagtaacctgctgatgaagggctacaccgtctgcttccaggggccttttactgacatg
actacagatgaaatggagtggatggtggagctctgtggagcaactgtagttaaagaccca
cttattttcgacagtaaacagaagtcacatcagctggccattgtacagcctggaccagag
tcgtcgtcgtcgtcgtccacatacagcagtctctccagacgtgccactgttgtgacacgc
ggttggctcttggataccgttgccacctacaccctccaaaacttcaacaactactcaccg
tga

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