Scophthalmus maximus (turbot): 118287386
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Entry
118287386 CDS
T09850
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04140
Autophagy - animal
smau05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118287386 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118287386 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118287386 (plekhm1)
Membrane trafficking [BR:
smau04131
]
SNARE
SNARE associated proteins
Others
118287386 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_11
PH_13
Cytochrome_C7
PHD_ash2p_like
Motif
Other DBs
NCBI-GeneID:
118287386
NCBI-ProteinID:
XP_035468400
LinkDB
All DBs
Position
16:complement(18110731..18121547)
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AA seq
1067 aa
AA seq
DB search
MLATQMPPDMPPEAKDVKQIKEKLARSLKALQKRYVMSDAVVTSEDSDANLLCCALEAVF
IHGIKSKYVRSEAAGRIRKGDRGPLPQPFFWSLLKTVTHRDVITELEKISFVGTDVGRCR
AWLRLALNHGLLECYLASLFREDSKLRAHYQPNALLLNAEERDVLLSYLQGLASLTFSLS
YKSAVLNEWTTTPLALAGLCPLSQVDSLHLSLNGDSKESWDTASQSSGSSDALDMQSEGR
GSGALRGGRDALNSSNLSLDTTGSSQLSSSLSSDSLLQGQDPRSPAAEQWSSSDLDLSNN
ICSKRPQKDSLTEFQGNGQCSQDSMREDSFVSSTGADQLSETAVFSSSDSEPQGSAAPSH
DPEDQPPNSDATSSGSLQTSLDSQSSDENHVIHSPSEVCDDTSDESHLDTDQEEVNSADV
KGSCESAQDEKEEESSTKSSSEPPALPGPRRSTSILSRKLSSDSLSHSCSWISDDDIYKP
QLEEVPDHDEVPPPAPTPEPKVSQSPPSVVHRRQIGLSNPFRGLLKLGHLERRGAMALWR
DYYCELSPFEFRLYLNAEERTCCDNCSLLRCEDAHVTSSEGRFELAFPGKRLYLRAANRD
EAEDWVDRIVEAVNKCRPAPRADEQWEVLQPCRENGVNDRKFSSSSSAPSSPERGLIPSD
TRTCGGLDTPPPPQEFNWTRTADLETDAIKEAILYFSTDPEARTWVPLIFSLSLEALKGF
RMQGERKFLQLNYPIEETRDVVPDVSMGGPAFFKLLTVRDTLRLRAEDAAEARSWRDLIR
GALDSYLESGEDGGSEEPALVHAGVTGNLHRLVQHRLKEDGALLVHLCTVPSEKGLDTQS
FKCAGCPQQIGPSRGRARLCEFSGQYYCDSCHHGDTTIIPSRMVHNWDLNQREVSKKALQ
LMAQVEQEPLLNLEQLNPELVTHSMSMAQAHNLRQRLRLFGDYLLTCRSGAYKKLQARME
QRTYLLESSHLYSVVDLRQIAEDEYTVYLMTLLQFASNHVFHCDLCMQRGFICQICHAND
TIFPFQFDTTTRCKDCKAVFHSACKAPGRPCPRCERMKKYRERDLQD
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgctagccacacagatgccaccagatatgccacccgaggccaaagatgtcaaacagatc
aaagagaagttggcacggtcgctcaaggccctgcagaagcgatacgtaatgtcggacgca
gtggtgaccagcgaggactccgacgctaacctgctatgctgcgccctggaggccgtcttc
atccacggtatcaagagcaagtatgtccgctcggaggccgcgggacggatccggaaggga
gatcggggacccctccctcagccttttttctggagcctcctcaagaccgtcacccaccgt
gacgtgatcacagagctggagaagatcagcttcgtgggcacggacgtgggtcgctgccga
gcgtggctgcggctggctctcaaccacggcctgctggagtgctacctggcgtcgctgttt
cgggaggactccaagctgcgggcgcactatcagcccaacgccctgcttctgaacgccgag
gagcgcgacgttctgctcagctacctccagggtctggcctcactgacattcagtctgtcc
tacaaatcggccgtcctcaacgaatggaccaccacgcccttggctctggccggactctgc
cccttatctcaggtggattcgctccacctgtccctcaatggcgattccaaggaatcgtgg
gacacggcgtctcagtcgtcgggctcgtcagacgccctggacatgcagtcggaggggagg
ggctctggtgctttgcgagggggcagggatgcactcaactcctctaatctgagcctggac
accaccggctcctcccagctctcctccagcctgagctctgacagcctcctgcaggggcag
gacccccgcagcccggcagcagagcagtggtcctcgagtgacctggacctgtccaataac
atctgcagcaagaggccacagaaagattcactgactgagtttcaggggaacgggcagtgc
agtcaggactccatgcgtgaagactccttcgtctcgagcacgggggcggatcagttatcg
gagacggccgttttcagcagctccgacagcgagccccaaggttctgccgcgccgtcccac
gacccggaagaccagcccccgaactccgacgccacatcctccggttctctccaaacgtcc
cttgattcccagtcgtcggacgagaaccacgtcatccactccccctctgaggtgtgcgac
gacacctccgatgagtcgcatttggacacggaccaagaggaagtaaattcggctgatgtg
aaggggagttgtgagtccgcccaggatgagaaagaagaagaaagctccacgaagagcagc
tcggagccgccggcacttccaggtccacgtcgttccaccagcatcctgagcaggaagttg
tcctcggattctctgtcgcattcctgttcgtggatctccgatgatgacatctacaagccc
cagctggaggaggtgccggaccacgacgaggtgcctccgcccgctcccacgcccgagccc
aaagtctcccagtcgcctcccagcgtcgtccatcgcaggcaaatcggactgtccaacccg
tttcgtggcttgctgaagctcggacatctggagagacgaggtgcaatggcgttgtggcga
gactactactgcgagctgtcgcccttcgagttccgcctgtacctcaacgcggaggagcgg
acctgctgcgacaactgctccctgctgcggtgcgaggacgctcatgtcacctcgtccgag
ggccgcttcgagttggccttccctggtaagcggctgtacctccgagcggccaatcgtgac
gaagccgaggactgggtggaccggatcgtcgaggccgtcaacaaatgcagaccagcacct
cgtgctgacgagcagtgggaggtgctgcagccgtgccgtgagaatggtgttaatgatcgc
aagttttcatcctcgtcctctgccccctccagccccgagagaggacttataccctctgac
acgaggacctgcggagggttggacacacctccccctccacaggagttcaactggactcgc
accgctgatttggaaacggacgccatcaaagaagccattttgtacttctctacagaccct
gaggctcggacatgggtgcccctgatcttctccctctccctggaggccttgaaaggcttc
cggatgcaaggggaaagaaagtttctgcagctgaactatcccattgaggaaacccgggac
gtggtgcctgacgtgtccatgggaggaccggcctttttcaaactgttgaccgtgagggat
acgctcagactccgggcagaggacgcagcggaggctcggtcctggagggatttgatccgt
ggagctctggactcgtacctggagagtggggaggacgggggctctgaggagccagctctg
gtacacgccggggtgacggggaatctccacaggctggtgcagcacagattaaaagaagat
ggcgcacttctggtccatctttgcaccgtgccctcagagaagggtctggacactcagagc
ttcaaatgtgcagggtgtcctcagcagattggcccgtcccggggcagagccaggctctgc
gagttctcaggccagtactactgtgactcctgtcaccacggcgacaccaccatcatcccc
tcacgcatggtgcacaactgggacctcaatcaacgagaggtgtctaagaaggccctgcag
ctaatggctcaggtggagcaggagcctttgctgaacctggagcaactgaaccccgagtta
gtgacgcactccatgtccatggctcaggcccacaacctgcggcagaggctgcgcctcttc
ggcgactatctcctcacctgccgcagcggagcctacaagaaactccaggccagaatggag
cagcgaacgtacttgttggagtcgagccatctgtacagcgtcgtggacctacgacagata
gccgaggacgaatacacagtctacctgatgacgctgctgcagttcgcctccaaccacgtg
ttccactgtgacctgtgcatgcagcgcggcttcatttgccagatatgccacgccaacgac
accatctttcccttccagtttgacaccaccaccaggtgtaaagattgtaaagccgtgttt
cacagtgcttgcaaggctcctggacgcccgtgtcctcgctgtgagcgaatgaagaaatac
cgggagagggatcttcaggactga
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