Scophthalmus maximus (turbot): 118287609
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Entry
118287609 CDS
T09850
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau00514
Other types of O-glycan biosynthesis
smau04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
118287609 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118287609 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
smau01003
]
118287609 (rfng)
Enzymes [BR:
smau01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
118287609 (rfng)
Glycosyltransferases [BR:
smau01003
]
Glycan extension
O-Glycan
118287609 (rfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
118287609
NCBI-ProteinID:
XP_035468862
UniProt:
A0A8D2ZGD3
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Position
16:complement(4378768..4394234)
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AA seq
408 aa
AA seq
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MNLLHWLVRMHIASVGVSKFCFLFSLAFCGLLLLLIPALQPPARQVDLPQPRPQIKPTQA
AQSHHTRVPAVSFHAGETGLATRLNGSSVGLGGSVETEVTRTDKRGVDTQKSQERGALPG
RKAGGLLGSTSHDPLDLKDIFIAVKTTRKYHKSRLELLIQTWVSRAKEQTFMFTDGEENE
LRTRTGANIINTNCSAAHTRQALCCKMSVEYDKFIESQKKWFCHVDDDNYVILPSLLRVL
SSYHHSQDVYLGRPSLDHPIEAAEKVRSDGSVSVKFWFATGGAGFCISRGLALKMSPWAS
LGNFISTAEKIRLPDDCTIGYIIEALLEVSLTHTHLFHSHLENLQKLPTDSVLEQVTLSY
GGFENRRNVVSIVGGLSLAEDPTRFKTIHCLLYPDTDWCPKPKPRHNI
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgctccattggctggtcaggatgcacatagcgtcagtgggtgtcagcaagttc
tgcttccttttttccctcgcgttctgtggcctcttgcttctcttaatcccggccttgcag
ccgccagctcgccaggtggacctgcctcagccgcgaccccaaatcaaacccacacaggcg
gctcagtcgcaccacaccagggtacctgcagtttctttccatgctggggaaactggcttg
gccacaaggctaaatgggagctcagtgggcctgggcggatccgttgagactgaagttacc
aggactgataagagaggggtggacacccaaaaaagccaagaaagaggggctctccctgga
agaaaggccggtggactcttaggatctacatcccatgatccattagatttgaaagacatt
tttattgctgttaagaccaccaggaagtaccacaagtccagactggagttgttgattcag
acctgggtttcccgagctaaagaacagaccttcatgttcacggatggtgaggaaaatgag
ctgcggacgagaacaggagccaacatcatcaacactaactgctcagcagctcacacccgc
caggccctgtgctgcaagatgtctgtggagtacgacaaattcatcgagtctcaaaaaaag
tggttctgccatgtggatgatgataactatgtaattctgcccagcctgctgcgagtgctt
tcctcctaccaccatagccaggatgtgtacctgggccggcccagtctggatcaccccata
gaggctgcagagaaagtcaggagtgacggatcagtgtcggttaagttctggttcgccaca
ggtggagcaggtttctgtatcagcagaggtctggcactgaaaatgagcccctgggccagt
ttggggaatttcatcagcacagcagagaagatccgactcccggacgactgcaccatcggc
tacatcatcgaggcactgctggaggtctccctaacacacacacatctcttccattctcac
ctggagaacctgcagaagctgccaactgactctgtacttgagcaggtgactctgagctac
ggaggctttgagaacagaagaaatgtggtcagcattgttggaggactttcactggctgaa
gaccccacaaggtttaagacaatccactgccttctgtacccagacacagactggtgtcca
aagcccaaacctcggcacaatatctga
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