Scophthalmus maximus (turbot): 118287855
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Entry
118287855 CDS
T09850
Symbol
scn4aa
Name
(RefSeq) sodium channel protein type 4 subunit alpha A isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smau04040
]
118287855 (scn4aa)
Ion channels [BR:
smau04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
118287855 (scn4aa)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
118287855
NCBI-ProteinID:
XP_035469329
LinkDB
All DBs
Position
16:complement(18136566..18157844)
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AA seq
1882 aa
AA seq
DB search
MATVLPPRGTEAFRPFSQESLAEIERHQEERKKAAEVEGHEGEEPETPNADLEAGKSLPM
IFGDPPSARLNTPLEDLDPFYKAQKTFIVISKGNTIFRFNAEPACYILSPFSLVRRGAIK
ILIHSLFSMFIMITILSNCVFMTMSNPPAWSKTVEYVFTGIYTIEATVKVLSRGFCVGSF
TFLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVAALIQS
VKKMVDVMILTVFALAVFALIGLQLFMGNLRHKCVRWPIETNETSFEFFNTTSTFGDTAS
INDTMGVNQTTYSNSTFNFLEYIENPENQYFLEGSLDALLCGNSSDAGKCPEGFTCMKAG
RNPNYGYTSFDSFGWAFLALFRLMTQDYWENVFQLILRAAGKTYMLFFVVIIFLGSFYLI
NLILAVVAMAYDEQNLATQREAIEKEEEFQRLLEQLKNQDQVQPLGSQATLTSKKSLSHH
TSPELADDELSLAYDHEVKDCNGRIIPHLLIRAPTFVESAADYEIRETSLGSVHSRLQVD
EPGLKQRSASVVTVLTAAAMEEYEDAQRPCPPGWYKFADKFLKWNCCTRWVVFKKWVLFV
VMDPFVDLGITICIVLNTLFMAMEHYPMTPEFDHMLSVGNLVFTGIFTAEMFFKLIAMDP
YYYFQVGWNIFDSIIVSLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIG
NSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKDCVCKISLDCELPRWHMHDFFHSFLIV
FRILCGEWIETMWDCMEVAGVGMCLVVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSTEE
DGEMNNLQIAIGRITRGINWFKAFAMQTVLQILGRNPKEQEDAAMEGAAPKMETIEMNHS
DTSQDLKMPDGLPNCLVEGRPSGFIVDGELSLNVPIAQGESDFEYLEEDDEDEQNSENSD
DEVCHKIMPQNTKLMGAINDGDSSVCSTVDYQPPEPEPEEVEEEEPDPVEPEACFTDECV
RRWPFLTVDITQGRGKKWWNLRRTCFTIVEHDWFETFIIFMILLSSGALAFEDIYIERRR
TIKTILEFADKIFTYVFIIEMLLKWVAYGFKTYFTNAWCWLDFFIVDISLISLVANWLDF
SDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGV
NLFAGKFYRCINTTTEELFPLTEVNNRSDCMAIEEATQEARWVNVKVNYDNVGKGYLSLL
QIATFKGWMDIMYAAVDSREVEEQPSYEINLYMYIYFVIFIIFGSFFTLNLFIGVIIDNF
NQQKKKFGDKDIFMTEEQKKYYDAMKKLGSKKPQKPIPRPTNLIQGLVFDFISQQFFDIF
IMVLICLNMVTMMVETDNQSAEKEDFLFKVNVSFIVIFTGECVLKLFALRQYFFTNGWNI
FDFVVVILSIAGTMLSDIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMS
LPALFNIGLLLFLIMFIFSIFAMSNFAYVKKGAGIDDMFNFETFGGSIVCLFEITTSAGW
DSLLLPMLNSNAPDCDPDFENPGTEVKGNCGNPGMGMMFFCSYIIISFLVVVNMYIAIIL
ENFNVAQEESGDALCEEDFEMFNETWEKFDLHGTQFIEYSKLSDFCDTLQMPLRVAKPNR
LRLIEMDLPLVIGDRIHCLDVLLAVTQLVLGDTVEMAAMRLSIEAKFILSNPTSDSFAPI
TTTVRHKEEESAAAVIQRAYRNHLLKRCTRHAAFMHRSKRMGGKDEGEDPPEKEGLLARR
LGVLYGSNVDLAQKMEQAALEALARQGPPSRETMSPGAQCGPEPPDTNTLVVPVEITNEV
LLHSAPQQHLLSLQANLRESIV
NT seq
5649 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgtgctccctccccgaggcaccgaagcgttccggcccttcagccaggaatca
ctggcggagatcgagaggcaccaggaggaaagaaaaaaggccgcagaagtagagggccac
gagggggaagagccagaaaccccgaacgctgacctggaggcgggcaagagcctgcccatg
atctttggagaccctccatcagcacggctcaacacacctctggaggacctggaccccttc
tacaaagcacagaaaacattcattgtgatcagcaaaggaaacacaatcttcaggttcaac
gctgaaccagcttgctacattctgagcccctttagcttggttaggagaggagccatcaaa
attctcatacattcattatttagcatgttcatcatgattacgattctgtcgaattgtgta
ttcatgacgatgagcaacccaccagcatggagtaaaactgttgagtatgtttttactggt
atttataccattgaggcaacagtcaaagtgttgtctcgaggtttctgtgttggatctttt
acattccttcgagatccatggaattggctggatttcatggtgatcagcatggcatacgtc
actgagtttgttgaccttggcaacgtgtcagccctcaggacatttcgtgtacttcgagcc
ctgaaaacaattactgtgattcctggtttgaaaaccatcgtggccgctttgatccagtcg
gtgaagaaaatggtggacgtcatgattctgactgtgtttgctctggcggtttttgccctc
atcggccttcagctcttcatgggaaatctgcgtcacaaatgtgtgcggtggcccatcgag
acaaatgaaacgtcatttgaattttttaacaccacgtccacattcggagacactgcgtct
atcaacgacaccatgggcgtcaatcaaacaacgtactccaacagtaccttcaattttttg
gaatatattgaaaacccagagaatcagtattttctggaaggcagcctagatgctcttctt
tgtgggaacagctctgatgctggaaagtgccctgaaggattcacctgcatgaaagctggg
aggaacccgaactacggctacaccagcttcgactcttttggctgggccttcctcgccctc
ttcagactcatgactcaggactactgggagaacgttttccagctgatcctgcgggcggct
ggtaagacatacatgctgttctttgtggtgattatctttctgggatccttctacctcatc
aacctcatcctggcggtggtagccatggcttacgatgagcagaatctggcaactcagcga
gaggcaatagagaaagaggaggagttccagcgactactggagcaactcaagaatcaagac
caggttcaacctcttgggagccaagccactctaaccagcaagaagtcgctcagtcatcac
acgtcgcctgagttggcggacgacgaattgagtcttgcatatgaccacgaagtcaaggat
tgtaatgggagaatcattccccatctgttgatcagagcacccacctttgttgagtctgct
gcagattatgaaatcagagagacgtcactgggctctgtgcacagcaggcttcaggtggac
gagccaggcctgaaacagagatctgctagtgttgtgactgtgctcactgcagctgctatg
gaagagtatgaagacgcacagaggccgtgcccacctggctggtacaagtttgccgacaag
ttcctgaagtggaactgctgcacgcgctgggtggtctttaaaaagtgggtgctctttgtg
gtgatggacccttttgtcgacttgggcatcaccatctgcattgtgctcaacaccctcttc
atggccatggagcactaccccatgaccccggaattcgaccacatgctctcagtggggaat
ctggttttcactgggatcttcactgcggaaatgttcttcaagctcatcgccatggatccc
tactattactttcaagttggctggaacattttcgacagcatcattgtctcgctcagtctc
gtggagttggggctggcgaatgtccaggggctctccgtcctcaggtctttccgtctgctt
cgtgtcttcaaactagccaaatcctggcccacgctcaacatgctgatcaagatcattggc
aactcagtgggagcattgggaaacctgactttggtgctggccatcattgtcttcatcttc
gccgtggtgggcatgcagctctttggcaagaactacaaggactgcgtgtgcaagatctcc
ttagactgtgagctgccacgctggcacatgcacgacttcttccactcgttcctcatcgtg
ttccgcatcctgtgcggggagtggatcgagaccatgtgggactgcatggaggtggccgga
gttgggatgtgtttagttgtcttcatgatggtcatggtcattggaaatctagtggtgctg
aacctcttcctggccctgctgctcagctcgttcagcggagacaacctttcgacggaggag
gacggggagatgaacaacctccagattgccatcggcaggatcacacggggcatcaactgg
ttcaaagcgtttgccatgcaaaccgttctgcagattctaggcagaaaccccaaggagcaa
gaggacgctgccatggagggcgcggcccctaaaatggagacaatcgaaatgaaccactcg
gacaccagtcaggatttaaaaatgccagacgggctacctaattgtttggtggaaggccgg
ccttctggatttattgtggatggagagctcagtctcaatgtgccaatcgcccagggagag
tcagactttgaatacctggaggaggatgatgaagatgaacagaactcagaaaactcagat
gatgaagtatgccacaaaattatgccacaaaacaccaaactgatgggtgcaataaatgat
ggggattcttcggtatgcagcacagtggactatcaaccacctgagcctgaaccagaggaa
gtggaagaggaagagccagacccagtggagccagaggcctgcttcaccgacgagtgtgtg
aggcgctggccatttctgaccgtggacatcacccaaggtagaggcaagaaatggtggaac
ctgcgcaggacttgcttcactattgtggagcatgactggtttgagaccttcataatcttt
atgatcctgctcagcagcggcgctctggcctttgaagacatatacatagaaagacgccga
accatcaaaactattctggagtttgctgacaaaattttcacctacgtctttatcatcgag
atgctccttaaatgggtggcatatggcttcaagacctacttcaccaacgcctggtgctgg
ttagactttttcattgttgatatttccctgataagtctagttgccaactggctggacttc
tctgaccttggaccaatcaaatccctcagaaccctcagggcactaaggccacttcgagca
ttgtccagatttgaagggatgagggtggtggtgaacgctcttgttggggcgattccctcc
atcttcaacgtgcttctggtgtgtctgatcttctggctcatcttcagcatcatgggagtt
aacttgttcgctggcaagttctaccgctgcatcaacaccaccacggaggagcttttcccc
ctcacggaggtcaacaacaggagcgattgcatggccatcgaagaagccacgcaggaggcg
cgctgggtcaacgtcaaagtcaactacgacaatgtcggaaaaggctacctgtccctgctc
caaattgcaactttcaaaggttggatggacatcatgtacgctgctgtcgactcaagagag
gtcgaggagcaaccgtcttatgagatcaacctgtacatgtacatatactttgtcatcttc
atcatctttggctctttcttcacactcaacctcttcatcggcgtcattattgacaatttc
aaccaacaaaagaaaaagtttggagataaagacatatttatgactgaggaacagaaaaaa
tactacgatgccatgaagaaacttggttccaagaagccacagaagccaattccacgtcca
acgaacctaatccagggcctggtgtttgacttcatcagtcagcagttctttgacatcttc
atcatggtgctcatctgcctcaacatggtgaccatgatggtggagacggacaaccagagc
gcggagaaggaggacttcctcttcaaagtgaacgtgtcgttcatagtcatcttcacagga
gagtgtgtgctgaagctctttgccctgcgacaatacttcttcaccaacggatggaacatt
tttgattttgttgtggtcatcttgtcaatagctggtacaatgctctcagacattatcgag
aagtactttgtgtcgccaactctgttcagagtgatcagactggccaggataggccggatt
ctgcgtcttatcaaaggcgcgaagggcatccggacgcttctctttgctctgatgatgtca
cttcctgccctgttcaatatcggcctcctgctcttcctcatcatgttcatcttttccata
ttcgccatgtcaaactttgcctacgtcaaaaagggggctgggatcgatgacatgtttaac
tttgagacgtttggcggcagcattgtctgcttgtttgagatcaccacgtcggcaggctgg
gacagccttttgctcccgatgctgaacagtaacgctccggactgcgatccagactttgag
aaccccggcacggaggtgaagggcaactgtggcaacccgggcatgggcatgatgttcttc
tgcagctacatcatcatctcattcttagtggtggtcaacatgtacatcgccatcatctta
gagaacttcaacgtggcgcaggaggagagcggcgatgcactctgcgaggaggactttgag
atgttcaacgagacttgggagaagttcgacttacatggaactcagttcattgagtatagc
aagctctcggatttctgcgatacgttgcagatgccgctgcgggtggccaagcccaaccgg
cttcgcctgattgaaatggacctgcccctggtcatcggggacaggatccactgcctggac
gtcctgttggccgtcacacagttggtcctgggcgacactgtggagatggcggcgatgcgg
ctgagcatagaggccaagttcatcctgagcaaccccacctcagactcctttgcaccgatc
accacgacggtacgccacaaagaagaggagagtgccgctgcggtcatccagagggcctac
cgcaaccacctgctgaaacgctgcacgcgccacgccgccttcatgcaccgctctaagaga
atgggtgggaaggacgaaggtgaagatccaccagaaaaagaagggctgctcgccagaagg
ttgggagtgctctatggcagcaatgtggacctggcgcagaagatggagcaggctgcttta
gaagctctagcaaggcaggggcctcccagtcgtgagacaatgtcaccgggagcccagtgt
ggtccagaaccaccggacacaaacaccctggttgtacctgtagaaattactaatgaggtt
ttattacattctgccccccaacaacacctcctgtccctgcaggcgaatctgagagagtca
attgtataa
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integrated database retrieval system
