Scophthalmus maximus (turbot): 118288271
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Entry
118288271 CDS
T09850
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118288271 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smau03041
]
118288271 (eftud2)
Spliceosome [BR:
smau03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
118288271 (eftud2)
Complex C
U5 SnRNP specific factors
118288271 (eftud2)
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
MMR_HSR1
Roc
Ras
Motif
Other DBs
NCBI-GeneID:
118288271
NCBI-ProteinID:
XP_035470067
UniProt:
A0A2U9CU03
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All DBs
Position
17:17506544..17518422
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AA seq
971 aa
AA seq
DB search
MEADLYDEFGNYIGPELDSDDDDDDLDAEDRDVDEGDDDDDDEPADADDDVPGMEVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKNKQFTLMEQELPATVYDMEFLAD
LMDGPELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDVDLRYTDILFTEQERGVGI
KSTPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSSIRISDGIVLFIDAAEGVMLNTER
LIKHAVQERMAITICINKVDRLIVELKLPPTDAYYKLRHIVDEVNGLLSTYSTDENLVVS
PLLGNVCFASSQYSICFTLGSFAKIYSDTYGDINYNEFSKRLWGDIYFNAKTRKFSKKAP
TSNAPRSFVEFVLEPLYKILSQVVGDVDTSLPRVLDELGIHLSKEELKLNIRPLLRLVCN
RFFGEFTGFVDMCVHHIPSPQEGAKAKIEHTYTGGLDSDLGEAMTECDPDGPLMCHTTKM
YSTEDGVQFHAFGRVLSGTIQAGQPLKVLGENYTLEDEEDSQICTVGRLWISVARYQIEV
NRVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCD
EPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSVF
HHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgatctgtacgatgagttcggaaactacatcggtcccgagttggactctgac
gatgacgacgacgacctggatgcggaggacagggatgtcgacgagggtgatgacgatgat
gacgacgaacccgccgatgcggatgacgacgtcccgggcatggaggtggtcctgcacgag
gacaagaagtactatccaacggcggaggaggtttacgggcctgaggtggaaactatcgtc
caggaggaagatacgcaacctctcacagagcccatcatcaagcccgtgaagaacaagcag
ttcaccctgatggagcaggagttacccgccactgtttatgatatggaattccttgcagat
ctgatggatggtcctgagctgatccgtaatgtcaccctctgtggtcacctgcatcacggc
aagacctgttttgtggactgcctgatcgaacaaacacacccagagatccggaagagagat
gatgtggatctccgatacacagacatcctctttacagaacaggagagaggagtcggtatc
aagagcacccccgtcacaatggtcctgcccgactccagaggcaaatcttacctctttaac
atcatggacacaccaggccatgtgaacttctctgacgaggtcacgtccagcatccggatc
tcagacggcatagtcctcttcatagatgccgcagaaggagtgatgctgaacacggagaga
ttgatcaagcacgccgttcaggagcgcatggccatcaccatctgcatcaacaaggtggac
cggctcatcgtagagctcaaactgcctccgacagacgcttattacaaactgcgccacatt
gtggacgaggtcaatggtttgctcagcacgtactccacagacgagaacctggtggtgtct
ccgctcctcgggaacgtctgctttgccagctctcagtacagcatctgcttcaccctgggc
tcctttgcaaagatctactctgacacctacggcgacatcaactacaacgagttctccaag
aggctctggggagacatttatttcaatgccaaaactcgcaaattctcaaagaaagctccc
accagtaacgccccgcgcagctttgtggaatttgttctggagcccctctacaagatcctt
tcacaggtggtcggggacgtggacacttctctcccccgggttctggacgagctggggatc
cacctgagcaaagaggagctgaagctgaacatcagaccgttgctgaggctcgtctgcaac
cgcttctttggagaattcactggctttgtggacatgtgtgtgcatcacatcccctcgcca
caagagggcgccaaggccaagatagagcacacctacacaggaggtctggactcggacctg
ggggaggccatgacggagtgcgaccccgacggccctttgatgtgccataccactaagatg
tacagcacagaggacggggttcagttccacgcatttggccgggtgctgagtgggaccatc
caggcgggacagcccctcaaggttttaggagagaactacacgctggaagacgaggaggac
tcgcagatctgcaccgtgggccgcctgtggatttccgtcgccagataccagatcgaagta
aatcgagttcccgctggcaactgggttctcatcgaaggttgtgaccagccgatcgtcaaa
accgccacaatcacggagcccagaggcaacgaagaagctcagattttcaggccgttgaag
ttcaacacggcgtccgttatcaagatcgcagtggagcccgtcaacccgtcggagcttcct
aagatgttggacgggctgaggaaggtcaacaagagctatccgtccctcaccaccaaggtt
gaggagtctggggaacatgtgatcttgggcacaggagaactctacctggactgcgtcatg
cacgacctgcgcaagatgtactctgagatcgacatcaaagttgccgacccagtggtgacc
ttctgtgagacagtcgtggagacatcatctctcaagtgctttgcggaaacgcccaacaaa
aagaacaagatcaccatgattgcggagccgctggagaaagggctggccgaggacatcgag
aacgaagtggtgcagatcacgtggaacaggaagaagctgggggagttcttccagacaaag
tacgactgggatctgcttgctgcccggtccatctgggccttcggacctgacacgaccgga
cccaacatcctggtggatgacacgctgccgtccgaggttgacaaggcgctgctcggctcc
gtcaaagacagcatcgttcagggcttccagtggggaaccagggagggacctctgtgtgac
gagcccatcaggaacgtaaagttcaagatcctggacgcggtcatcgctcaggagccgctc
caccgaggaggaggccaggtcatccccacagccaggagggtggtgtactccgccttcctc
atggccacaccgaggttgatggagccatattactttgtggaggttcaggctccggcagat
tgtgtgtctgctgtctacacagtgctcgctagaaggagaggtcacgtgacgcaggacgcg
cccattcccggttcccctctctacaccatcaaagccttcatcccggctatcgactccttc
ggctttgagactgacctccgcacgcacacgcagggacaggccttcgctctgtccgtgttc
caccactggcagatcgttcccggtgaccccctggataagagcatcgtgatccggcctctg
gagcctcagcctgccccccacctcgccagagagtttatgatcaagacccgaagacgcaag
ggtctgagcgaagacgtgagtatcagcaagttcttcgacgaccccatgttgctggagttg
gccaaacaggacgtggtgctcaactaccccatgtga
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