Scophthalmus maximus (turbot): 118290113
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Entry
118290113 CDS
T09850
Symbol
otofa
Name
(RefSeq) otoferlin isoform X2
KO
K19949
otoferlin
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118290113 (otofa)
Membrane trafficking [BR:
smau04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118290113 (otofa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
Ferlin_C
FerB
dsrm_Ferlin
FerI
Ferritin-like
Motif
Other DBs
NCBI-GeneID:
118290113
NCBI-ProteinID:
XP_035473400
LinkDB
All DBs
Position
18:complement(13275360..13335998)
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AA seq
1996 aa
AA seq
DB search
MMALVVHLKTVAHLRGKGDRIAKVTFRGLSFLSRVAENCDEVAHFNETFRWPIASRLDGN
EMLEIQVYNYSKVFSNRLVGTFCMVLQKVAEEGHLELTETLLDDNNASIKTSVTIEIRYQ
AMDGTVGVWSDGEFLDVPDDRDGMFTFETDSLLSGRSHGSATSPGRTLQGSIPTFRKAGK
GVFSAMKLGKMKSSKDDHKRADEPAVLDMEDLDRKAMRLAGTFDPDTISLASVTAVTTNV
SNKRSKPDIKMEPSSGRPVDYQISITVIEARQLIGLNMDPVVCVEIGDDKKYTSMKESTN
CPYYNDYFVFDFHVPPDVMFDKIIKLSVIHSKNLLRSGTLVGTFKMDVGTVYSQPEHQFY
HKWASLSDPDDITAGCKGYIKCDIAVVGKGDNIKTPHKANETDEDDLEGNLLLPEGIPAE
RQWARFYVKIYRAEGLPKMNTSIMANVKKAFIGENRDLVDPYVQVQFAGQKGKTSVQKSS
YEPIWNEQVIFTELFPPLCKRLKVQIRDSDKVNDVAIGTHFIDLRKISNDGDKGFLPTMG
PAWVNMYGSTRQYTLMDEHQDLNDGLGEGVSFRARLLLSVAVEILDTTSPEIISSTDVQV
ECVSNISESATGKIEEFFLFGSFLEATMIDRKIGDKPISFEITLGNYGNQIDGVSKPSSA
KKKKKDAENEEEESELIQNSSEDEADEDRDLVSVSSTPVMKPVITDRNYFHLPYFAKKPC
VYIKSWWQDQRRRLYNSNMMDKIADKLEEGLNDVQEVIKTEKAFPERRLRGVLEELSVGC
SRFVTLANKDVNLAGRTKLDRERLKSCMREMDSMAQQAKQIRTQVKKNTVRDKLKMAQNF
LQKLRFLADEPQHSIPDIFIWMMSNTKRIAYARIPSKDILYSIVDEESGKDCGKVKAVFL
KLPGKKGFGHAGWTVQAKLELYLWLGLNKQRKDFLSGLPNGFEEIKADKMGPGLNSVPPV
SLVYNMKQVFQLRAHMYQARSLFAADSSGLSDPFARVFFSTHSQVTEVLSETLCPTWDQL
LVFDDVELFGEASELRDDPPIIVVELYDQDTVGKAEFIGRTFAKPTIKMCEEHYGPPRFP
PQLEYYQIYRGNCTAGELLAAFELLQIGQGGRADLPPLEGPTDSEHGPILPVPLGIRPVL
SRYRIEVLFWGLRDLKRINLAQVDRPRVDIECAGRGVQSALIQNYKKNPNFSTLVKWFEV
DLPENELLHPPLNIRVVDCRAFGRYILVGSHAVTSLRRFIYSAPDKTSNNWATAGDLIVN
MDSEPLVRKMDTVVKLDAMSDAVVKVDMNEEESDKEKKKKKKKKKGGVEEEDETDESVLD
WWSKYFASIETLKETLRAQEAAQAEAEEREDMEIAAEAADIKPDDLLLKGSKTKERGKDK
KSSKDKKKSHASDGMEKRPVKARVDELLVYNKELESEYANFEDWLHTFNLYRGKAGDDDE
HALDDDRIVGRFKGSLCMYKLPLSEEITREAGFDPNMGMFQSIPHNDPINVLVRVYVVRA
TDLHPADINGKADPYVVIKLGKSEVKDKENYISKQLNPVFGKSFDIEATFPMESMLTVSV
YDWDLVGTDDLIGETKIDLENRFYSKYRATCGISSNYSVHGYNVWRDPLKPSQILTKLCK
DGKIDGPHYGPGGKVKVASRIFLGPTEIEDENGLKKQTEEHLSLNVLNHWEEIPRVGCKL
VPEHVETRPLLNVDKPGIEQGRIEMWVDMFPMDMPAPGPAIDISPRKPKRYELRVIIWNT
DEVILEDDDYFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRFVYPFDYLM
AEEKIVISKKESMFSWDETEYKIPPRLTLQVWDADHFSADDFLGAIELDLNRFPRGAKTA
KQCSLNMIRNEHELPTISIFKQKRVKGWWPFVARDENDEMELTGKVEAELHLVTAEEAEK
SPVGLGRNEPDPLEKPNRPDTSLMWFLSPLKSIRYFIWHNYRWLILKALGLILLLLMLGL
FLYSVPGYLVKKMLGA
NT seq
5991 nt
NT seq
+upstream
nt +downstream
nt
atgatggctctggtggttcacctgaagacggtcgctcaccttcgggggaagggggacagg
atcgccaaagttacgttcagaggtctgtccttcctcagccgtgtggcagagaactgtgat
gaggtggcccactttaatgagacattccgatggcccattgccagcaggctggacggaaac
gagatgctggagatccaagtgtacaactacagcaaagtcttctccaacagactggtgggg
actttctgtatggtgcttcagaaggtggcagaagagggacacctagagttgaccgaaaca
ctacttgatgataacaacgcgtcaataaagaccagtgttaccatagagatcagataccag
gcgatggatggcacagtgggagtgtggagcgacggggagttcctggatgtgcccgacgac
cgtgatgggatgtttacattcgaaactgacagcttgctctctggacgtagccatgggtca
gcgacgtcccctggacggaccttacagggatccataccgaccttcagaaaagcagggaag
ggagttttctccgccatgaagctcggcaagatgaagagctctaaagacgatcacaagaga
gcagatgagccagcagtcctggacatggaggacctggacaggaaggcgatgcgtctggct
ggaacatttgacccagacaccatctctctggcctccgtcaccgccgtcaccaccaacgtg
tcaaataaaaggtcaaagccagatatcaagatggaaccgagctctggacgaccagtggat
tatcagatcagcatcacagtgatcgaggcccggcagctgatcggcctcaacatggaccct
gtggtgtgtgtggagatcggagacgataagaaatacacatccatgaaggagtccaccaac
tgcccgtactacaacgactatttcgtctttgacttccacgtccctcctgatgtcatgttt
gacaagatcatcaagctttcagtcattcactctaaaaaccttcttcggagtgggaccttg
gtgggaaccttcaaaatggacgttgggactgtttattctcagcctgaacaccagttctac
cacaagtgggccagcctgtccgaccctgatgacatcacggctggatgcaaaggatatata
aagtgtgacattgctgtggtgggaaagggtgacaacatcaagaccccgcacaaggccaac
gagacagatgaagacgacctggaggggaacctcctgctcccagagggcatcccagcagag
aggcagtgggccaggttttatgtgaagatctaccgcgctgagggacttcctaaaatgaac
accagcatcatggctaatgtgaaaaaggccttcataggcgagaacagagacctggtggac
ccctacgttcaagtgcagtttgctgggcagaaagggaagacttcagtccagaagagcagc
tatgaaccgatctggaacgagcaggtcatcttcactgagctcttccctccgctctgcaag
cgcctgaaggtccagatacgggactcggataaggtcaacgatgttgccataggaacccac
tttattgacctgcgcaagatatcgaatgatggcgataaagggttcctgcccactatgggc
ccagcctgggtcaacatgtatggctccactcgtcagtacacgttgatggacgagcaccag
gacttgaatgatggactcggagagggcgtgtccttcagagcccgccttctgctctccgtc
gctgtggagatcctggacaccacttcgcccgagatcatcagctccactgacgttcaggtc
gagtgtgtttccaacatctccgagagcgccacaggaaaaatagaagagttcttcctcttt
ggctccttcctggaggccaccatgatcgacaggaagattggagacaaaccgataagtttt
gaaatcacactaggtaactacggaaaccagatagatggtgtcagcaagccctcgtcggcg
aagaagaagaagaaagatgcggagaacgaagaggaggagagcgagctcatccagaactcc
agtgaggacgaggcggatgaggacagggacctggtctcagtctcctccactccggtcatg
aagcctgtcatcaccgacagaaattacttccatcttccctactttgcaaagaagccatgt
gtctacatcaagagctggtggcaggaccaaagacgacgactctacaactccaacatgatg
gataagatcgctgacaagctggaggagggtttgaatgatgtccaggaggtcattaagaca
gagaaagcctttcccgagcgccgactacggggagtgctggaggagctcagcgttggctgc
agtcgttttgtgactctggctaacaaggatgtgaacctggcaggcagaaccaaactggac
cgagaacgactcaagtcctgcatgagagagatggacagcatggcccagcaggccaaacag
atccggactcaggtgaagaagaacacagtcagagacaaactcaagatggcacagaacttc
ctgcagaagcttcgttttcttgctgatgagcctcagcacagcattccagacattttcatc
tggatgatgagcaacaccaagcgcatcgcctatgcccggattccctccaaagacatcctg
tactccatagtggatgaggaatcgggtaaagactgtggtaaagtcaaagccgtcttcctc
aagctgcccggtaagaagggcttcggtcatgcaggctggaccgttcaagctaagctggag
ctgtatctgtggctgggcctcaacaagcagagaaaggacttcctcagcggtctacccaat
ggctttgaagagattaaagctgataaaatgggccctggtctcaactctgtcccccctgtc
agcctcgtctacaacatgaagcaggtgtttcagctgcgagcacacatgtaccaggcccgc
agtctgtttgccgctgacagcagtggcctttcagatcccttcgctcgggtcttcttctcc
acacacagccaggttactgaggtcctgagtgagaccctttgtcctacgtgggaccagctg
ctggtgtttgacgatgtggagctgttcggagaggccagtgagctgagagacgacccaccg
atcatcgtcgtcgaactctatgaccaggacactgtgggcaaggcagagttcattggcagg
acatttgcgaagcccaccatcaagatgtgcgaagagcactacggcccgccgaggttccca
ccgcagctggagtactaccagatctacagagggaactgcaccgccggggaactgctggct
gcctttgaactgctgcagatcggtcaaggaggcagagctgaccttcctcccctcgagggg
ccaaccgactctgagcacgggcccattttacccgtgccgctggggatccggcccgtcttg
agccgctatcgcattgaggttttgttctgggggttaagggacctgaagaggattaacttg
gctcaggtggatcgaccccgtgtcgacatagagtgtgcaggcagaggtgttcaatctgcc
ctcatccaaaactacaagaaaaaccccaacttcagcacgctggtcaaatggttcgaggtg
gaccttccggaaaatgagcttctgcatccccctctcaacatccgggtggtggactgcaga
gcgtttggccgctacatcctggtgggctcccacgctgtcaccagcctgagacgattcatc
tacagcgccccagacaagacatccaacaactgggccactgcaggtgacctcatcgtcaac
atggactcagagcctctggtccgaaagatggacacagttgtcaagttggacgctatgtct
gatgctgttgtaaaagttgacatgaacgaggaggagagcgataaagagaaaaagaagaag
aagaagaaaaagaagggaggagtcgaggaagaagacgagacggacgagagcgtgctggac
tggtggtccaaatattttgcctcaattgagacactaaaagagaccctcagagcccaggag
gcagctcaggcagaggcggaagagagagaggacatggagatagcagcagaggcggcagac
atcaaacccgatgaccttcttctgaaaggctccaagacgaaagaaaggggcaaagacaag
aagagctccaaggacaagaagaagagtcatgcttcggacgggatggagaaacggccggtt
aaagcgagagtggacgagctgttggtgtacaacaaggagttggagagtgagtatgccaac
tttgaagactggcttcacactttcaacttgtacagaggtaaagcaggagacgatgacgaa
cacgcgctggacgacgaccggattgttggtagattcaagggatccctgtgtatgtacaag
ctccctctgtctgaggagatcaccagagaggcgggatttgatcctaatatgggcatgttc
cagagcattccccataacgatccaatcaacgtccttgtccgtgtatatgtggtcagggct
actgatcttcatcccgctgatatcaatgggaaggctgatccatatgttgtcatcaaactg
ggcaagtcggaggtcaaagacaaagagaactacatctccaaacagctcaatcctgtattt
ggcaaatcatttgacattgaggccactttccccatggagtcgatgctcacagtgtctgtg
tacgactgggacttggttggcaccgacgacctgatcggggagacaaaaattgacctggag
aatcgattctacagcaaatacagagccacctgtggcatttcatccaactactctgtccat
ggatacaacgtgtggcgggacccgctgaagcccagccagatcctgactaagctctgcaag
gacggcaagatcgatggacctcactacggacctggaggcaaagtcaaggtggcgagtcga
atcttcctgggaccaacagagatagaagacgagaatggtttgaagaagcagactgaggag
cacctgtctctgaatgtgctcaaccactgggaggagatcccaagagtcggctgcaagctt
gtccccgagcacgtggagaccagacccctgctgaacgtcgacaagcccggcatcgaacag
ggccgtattgagatgtgggtcgatatgtttccgatggacatgcccgcccccggacctgcg
attgacatatcaccacggaaaccaaagagatatgagctcagggtgattatttggaataca
gacgaagtaatactggaggacgatgattacttcactggggaaaagtccagtgacatattt
gtgagggggtggctgaaagggcagcaggaggacaagcaggacacggacgtgcactatcac
tcgctgaccggcgagggcaacttcaactggcgcttcgtctaccccttcgattacctcatg
gccgaggagaaaatcgtcatctctaagaaagagtccatgttctcctgggacgagaccgag
tacaagatcccccctcgcctcacgctgcaggtgtgggacgctgaccacttctcggccgac
gacttcctgggtgcgattgagctggacctgaaccggttcccccgcggcgccaagacggcc
aagcagtgctccctcaacatgatccgaaatgagcacgagcttcccaccatttccatcttc
aaacagaagcgagtgaaaggctggtggccgtttgtcgcccgcgatgagaacgatgagatg
gagctcacaggcaaagttgaggccgagcttcacctggtgactgcagaagaagcggagaaa
agtcccgtaggcctgggacggaacgagccggacccgctggagaaaccaaatcgcccggac
accagtctaatgtggtttctgagtcccctgaagtccattcgttacttcatctggcacaac
taccgctggctgatcctcaaggccctggggctgatactgctgctgctcatgctgggcctc
ttcctctactctgtccccggctacctggtcaagaagatgctgggggcctga
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