Scophthalmus maximus (turbot): 118292254
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Entry
118292254 CDS
T09850
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118292254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smau03036
]
118292254
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
118292254
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
118292254
NCBI-ProteinID:
XP_047186300
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All DBs
Position
22:14050273..14062050
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AA seq
958 aa
AA seq
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MQNSESSITKSSDAPTLRRPPSVAESSRRRRRHESPHGHAMETDGEQSQQGASTNGSAAS
GTTTTTSSSSPSSRPSPMNSMSLYERQAVQALQALQRQPNAAQYFQQLMLQQQINNAQLQ
NLAAVQQATLAASRQSSPSSSSSSQTSSTTSASVTSGTGSTTSSRPMGASATSTISQSVL
LSGTAAGQGQMYLRVNRSLRAPISSQLIFMPGSTATAAVATVAQQPQHQQQAEATPTSSA
GGQLDNDQAQNLAMRGVTGPKGVKTEAPERSDSAAFSLVQPSHQSNLHSPSKPQPPHIKI
PTYPQPTNLKAHPSSSSGATSSSSSIPLSQLLLHGTRTLATGTSAPTAAHTLVLTSNAGS
QPHGYPVGTATIKPAVNAQTLVVQPLQKTSLGGEKSGHGNGPVPIQPKTLQGLRLPLHLP
SRNPPPILPAPPPASSSAQSSQLPPPPHIPVQIVGARQSTLGNTQAMALARGSCSQDGAA
AVLTSSSSLLTMVASIASREGGVVGRGVGLKALQSPQEAPPLAQVSQVHPQANQSSAQSQ
NGSLAQNPASSQSPGVSSPPSSLSRSSLSLPLTTGEQRGPAAAATTNGDSSGSQTPQGKQ
AIGSLKRKSDSNSANDEDGPSPPRIQPVRDHAPVLPTNPVKAGSGAPPPAPPSPSPVLSV
SRGACGPGERAPPPQAVVKPHVLTHLIEGFVIQEGAEPFPVCGSVKDSTSEDLTNDSPDM
HQPETVTTATVLKCEYCKNFAPAGQFRGTKRFCSMACAKSMYWFPRYNVSFRQHFCMRQG
HGQGQDQDQGHHQGHHLSNSDEEGGIARRRVPRRTSSEIASAKIAGRPLPVKCRSESSRS
DEESSGEEDEDDPMSLSPASSSASCRQPASPLLPLTEGSGPGCPPAAAALLPAQWSVEDV
SQFISSLQGCEELASQFLSQEIDGQALLLLKEEHLMSTMNIKLGPALKICAHINNLRD
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacagtgaaagcagcatcaccaagagcagcgacgctccgacgctccggaggccg
ccgagtgtcgccgagtcgtcccgcaggcggaggaggcacgagagcccgcacgggcacgcc
atggagacagatggagagcagagccagcagggggcctcgaccaatgggagcgctgcatct
gggaccaccaccaccacctcctcctcctcgccctcctcccgcccctctcccatgaactcc
atgtctctgtacgagcgacaggcggtgcaggcgctgcaggcgttgcagcggcagccgaac
gcagctcagtacttccagcagctgatgctgcagcagcagatcaacaacgctcagctgcag
aacctggcggccgtgcagcaggctactctggctgccagtcgtcagtccagtccgtccagc
agcagctcgtctcagaccagcagtaccacgtccgcgagtgtaacatctggaacggggtcc
accaccagcagccgtccgatgggagcctcggcaacgtccacaatcagccaatcagtgctt
ctgagcgggacggcggcgggacagggacaaatgtacctgagggtcaaccggtcgctgagg
gcccccatctcctcccagctcatcttcatgcccggcagcacggcaactgctgccgtggcg
accgtagcccagcagccacagcatcagcagcaggcagaggcgactccgacttcctccgcc
ggcggccaattggacaacgaccaggcgcagaatctagccatgcgaggagtgacaggtccc
aaaggtgtaaagaccgaagcccccgagaggagcgactcagctgccttctctctggtgcag
ccgtcccaccagtcaaacctccactctccctccaagccccagcccccccacatcaagatc
cccacctaccctcagcccaccaacctcaaagcccacccctcctcttcctctggtgctacc
tcctcttcctcctccatccctctctcccagctcctgcttcacggaacccggaccctggcc
acgggaacttcggctcccaccgcggcgcacaccctggtcctcacgtccaacgcaggctcg
cagccccacggctacccggtgggcacggcgaccatcaagccggcggtcaacgctcagact
ctggtggtgcagccactgcagaaaacctcgctcggcggcgagaagtcgggccacggcaac
ggacccgtcccgatccagccgaaaactctgcaggggctacgactgccgctccaccttccc
tccaggaaccccccgcccatcctccccgccccaccgccggccagcagctccgcccagtct
tcgcagctgccgccgccgccccacatcccagtgcagatcgtgggagcaaggcagagcact
ctgggaaacacccaggctatggctctggcccggggcagctgcagccaggacggagccgcc
gccgtcctcaccagctcgtccagccttctcaccatggtggcttccatcgcctcaagggag
ggtggggtcgtgggccgcggggtggggctaaaggcacttcagtcgccccaggaggcgccg
ccactggctcaggtctcccaagtgcatccgcaggccaatcaaagctctgcgcagagtcag
aacggatccctggctcaaaaccctgcctcctctcagtcccctggcgtttcctctcctccc
tcctcgctgtctcgttcctccctctccctccccctgacgactggagagcagagaggaccg
gcagccgctgcgaccactaacggagactcgtcgggaagtcagacgccgcagggaaagcag
gcgattggctcgctaaaaaggaagtcggactcaaattcggccaatgacgaagatggcccc
tcccctccgaggatccagcctgtcagagatcacgcccctgtgctcccgaccaatcccgtc
aaagcaggctccggagctcctcccccagctcctccctctccctccccagtcctgtcggtg
tcacgcggggcgtgcggcccgggggagagagctcctccccctcaggccgtggttaagcct
catgtcctcacgcacctcatagagggcttcgtcatccaggaaggggcggagcctttcccc
gtgtgtgggtcagtgaaggactcgaccagtgaggatctgaccaatgacagtccggacatg
caccagccagagactgttaccacagcgacagtgctgaagtgtgagtactgtaaaaacttt
gctcctgccggtcagttccgaggcaccaaacgattctgctccatggcctgtgccaagagt
atgtattggttccccaggtacaacgtcagcttcaggcagcacttctgcatgcggcagggt
cacggccagggtcaggatcaggaccaaggtcaccaccaaggtcaccacctctccaactcg
gacgaggagggaggcatcgccaggcggagggttccccgcaggaccagctccgaaatagcc
agcgccaagatcgcagggcgacccctgcccgtcaagtgccgttcggagtcaagccgctca
gacgaggagtcgagcggcgaggaggacgaagacgaccccatgtccctgtcgccggcctcc
tcctccgcctcgtgccgccagcctgcgtctcctctgctgccgctgacggagggttcgggg
cccggctgcccgcccgccgccgccgccctcctccccgcccagtggagcgtggaggacgtg
tcgcagttcatctcctcgctgcaaggctgcgaggagctcgcctcccagttcctgtcgcag
gagatcgacggacaggcgctgctgctgctgaaggaggagcatctcatgtccaccatgaac
atcaagctcggccccgccctgaagatctgcgcccacatcaacaacctgagggactga
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