Scophthalmus maximus (turbot): 118294629
Help
Entry
118294629 CDS
T09850
Symbol
tiam1b
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1 isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04530
Tight junction
smau04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118294629 (tiam1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
118294629 (tiam1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smau04990
]
118294629 (tiam1b)
Domain-containing proteins not elsewhere classified [BR:
smau04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
118294629 (tiam1b)
BRITE hierarchy
Motif
Pfam:
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
PDZ_2
PDZ_6
PH_11
Motif
Other DBs
NCBI-GeneID:
118294629
NCBI-ProteinID:
XP_035477552
EnsemblRapid:
ENSSMAG00025015090
LinkDB
All DBs
Position
11:complement(8257349..8299929)
Genome browser
AA seq
1603 aa
AA seq
DB search
MGNVESQIGDHGLYGNERSYLSRKHMSRSLRISNKQSRRSRHTSSGKIEHRNSETSTRSS
STPSIPQSLADNGLEPFNETNVLPDFGSPIWVDRVAMNLRPVSFHNDLANPSVHMNAMHI
TLPGPTAEEVQDQDVYTGEVTYLQKTRDGTKETIIFKKKRSKSADMWRDDSLEFSLSDLS
QEQLTSTEEIIDAANERDFTDCEGHLQSSPTESADRANSLDELYSQKSPARRQPHGRYSK
WHEANRAIREGEDDKLLSPSEEDGNSYGAFTLPCRRSHCLSEGLSSHQAAMCATMQGRRA
QTIQDVTAGEGSEYEDSGIDGVTVEPEHQSRRYKTMSASFSVCSAHGRGMFAGSDSGSSS
GGGAGECVQGVYENFRQELEMSSCQTESLEEAGSALSDEQSTMSSAYQSDPLLSVAQGMV
RKAGRLAVKNFLVHKKNKKVESATRRKWKSYWVSLKGCTLFFYDTDGGSEIDNSSIPKHA
VWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTCSQTELENWITAIHSACATAVARQH
HREDTVRLLRAEIKKLEQKIDMDEKMKKMGDMQLSAVTDTKKRKTILDQIFLWEQNLEQF
HMDLFRFRCYLASLQGGELPNPKRLLAFASRPTKLAMGRLGIFSVSSFHALVAARTETGV
RRRTQAMSRSCSKRKSRFSSLWGLDTTSKKKTKAHPTINQVFADGEDPAKQTVDGIYDDH
AKEHTKSEAGTVKSLPRPSTESDIWVPDHLTPSWVCLPNDQPVLTIIQPGESALCVLETI
CKAHQLDPTKHYLRLKFLIENKVQFYIPKPEEDVCDLLYKEIELCSKITKVIQFDRDESC
MIGYGFSISVVEEDGVQQLYITDVKAGGLAFAKGLYAGDEILKLNGKASHSLNFSDMKAA
FSQASLALTVNTLRSVDRRQLCYVPPRRSDEEEDLYTDIFSQSQEEILDDGVGLFLESSG
DSLDDDSEILSDFACSKTFFVLLQSTEQVAAFCRSLHDMNPSECVSSSPSPDSPFPPLAT
PRQLSDADKLRKVICELVETERTYVKDLNCLIGRYLTPLQKETFLTQDELDVLFGNLPEM
VEFQVEFLKTLEDGTRLVPDLEKLERVDQFKKILFSLGGSFLYYADRFKIYSAFCASHTK
VPKVLVKAKTDHEFKAFLDERNPKQQHSSTLESYLIKPIQRVLKYPLLLKELYSLTDPDS
EEHYHLDVAMKAMNKVASHINEMQKIHEEFGAVFDLLITEQSGEKKVVADLSMGDLLLHT
TVTWINPPASLGKWKKEPQMATFVFKMAVVFVCKDGSKQKKKMGGSHRVSVSSDEKDPFR
FRHMIPTNALQVRSLANSDGESSAVCEIVHTKSESEGRPERTFQLCCSSPESRKDFLKTV
HSILREKHRRQLLKTESLPLNQQYVPFGGKRLCALKGARPVINRAASAPTRTLGRRKLLR
NRFTIDTDIVFDGEPEQELASPQEPGSDRLQQEDKPNQLQSELAGDTDRWVEEQFDLEEY
EDREEVKETDILSDEDDESCQTPGARSAEADLEAPVMALSLVGEEKEESESLKSPTGSET
HDLKLVDTGKQSGANNDDVADQKHQTERGEIWVRRDPSGSSPA
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgtcgagagtcagattggggaccatggcctctacggcaacgagcgcagctat
ctgtcacgtaagcacatgtctcggtcacttcgcatctccaacaagcagtccaggcgctct
cgacatacttcatcggggaaaatagagcaccggaactctgagacgagcacgcgctcgagt
agcacccccagcatcccacagtccctggctgacaatggcctggagcccttcaatgagaca
aatgtcctcccggattttggaagccccatttgggtggaccgcgtggccatgaatctgcga
cctgtgtcctttcacaatgacctggccaatccctccgtgcacatgaatgcaatgcacata
accctacccgggcccactgcagaggaggtgcaggaccaagatgtgtacacgggcgaagta
acgtacctccagaaaacccgggacggtaccaaggagaccatcatattcaagaagaagagg
tcgaagtccgcggacatgtggcgagatgacagcctggagttctccctgtccgacctcagc
caggagcagctgacgagcacggaggaaatcatcgacgcagccaacgagagagactttacc
gactgcgaaggccacctgcagtccagccccacagaatccgccgacagggcgaactccctg
gacgagctgtacagccagaagagccctgcccgcaggcaaccccacggccgctattccaag
tggcacgaggccaacagggcaatcagggaaggcgaagatgataagttgctctccccctcg
gaggaggatggcaacagttacggtgcattcacccttccctgcaggcgctcccactgcctg
tccgaaggcctgagcagccaccaggccgccatgtgtgccactatgcagggcaggagggcg
cagaccatacaggatgtcacagccggggagggcagcgagtacgaggacagcgggatcgac
ggggtgacggtggagccggagcaccagtccagacgttacaagaccatgtcggcctccttc
tcggtgtgctcggcgcacggccgaggcatgttcgccggcagcgacagcggcagcagcagc
ggcggcggggccggcgagtgtgtacagggcgtgtacgagaactttcggcaggaactcgag
atgagctcctgccagacggagagcttggaggaggcagggtccgccctcagcgatgagcag
agcacaatgagctccgcctaccagtctgaccccttgctcagcgttgcccaggggatggtg
cggaaagctggcaggcttgcggtcaagaacttcctcgtacacaagaagaacaagaaagtg
gagtcagccaccaggcgcaagtggaagagttactgggtttccctgaaaggttgcactctg
tttttctatgacaccgatgggggctcagagatcgacaacagcagtattcccaaacacgcc
gtctgggtagagaacagtattgtccaggctgtgccagagcatcccaaaaaggactttgtg
ttctgtctcagcaactccctgggagatgcctttctgttccagacctgcagccagacggag
ctggagaactggatcacggccatccactcagcgtgtgccaccgccgtcgcccgccagcac
cacagagaggacacggtgcggctgctgcgcgccgagatcaagaagctggagcagaagatc
gacatggacgagaagatgaagaagatgggagacatgcaactgtcggctgtcaccgacacc
aagaagagaaagacgatcctggatcaaatcttcctctgggagcagaacctggagcagttt
cacatggatctattccgcttcaggtgctacctggccagcctgcagggaggagagttgcca
aaccccaaacgcctcctagccttcgcctctcgccccaccaagctggcaatgggccgactg
ggtattttctccgtttcttccttccacgcactggtggcagcacgcacagagaccggagtg
agacggcgaacacaggccatgtcccgttcttgcagcaaacgcaagagcaggttctcctcc
ctctggggtctggatactacctcaaagaaaaagacaaaagcccatcccactatcaaccag
gtctttgctgatggtgaagaccctgcgaaacagactgtagatggcatatatgacgatcat
gctaaggaacatacaaaaagcgaggcgggaactgtgaaaagccttccacggcccagcacg
gagagcgacatctgggtccccgaccacctgaccccctcctgggtgtgtctgccaaatgac
cagccagtactaaccatcatccaaccaggggaatctgcgctgtgcgttttggaaaccatc
tgcaaggctcatcagctcgatcccaccaagcattacctgagactcaaattcctaatcgaa
aacaaagtgcagttctacattcctaaaccagaggaggatgtatgcgacttgctttacaag
gaaatcgagctctgctccaagattacaaaagtgatccagtttgacagagatgagtcctgc
atgattggttacggtttctccatttcagtggtggaggaggacggagtgcagcagctctac
atcactgacgtgaaggcgggtggattagccttcgccaaaggtctatatgcaggggacgaa
atactgaagctgaacggaaaagcctctcacagtctcaacttctccgacatgaaggcagca
ttctcacaagcatcgctggctttgacggtcaacactctgcgttctgtggaccgccgccag
ctgtgctatgtgccgccacgccgctcagacgaagaggaagatctctacaccgacatcttc
tcgcagagtcaagaggagatcctggatgatggggtgggtctgtttctggagagctccgga
gacagcctggacgacgactccgagatcctcagtgactttgcgtgcagtaagacctttttt
gttcttttgcagagcacggagcaggtcgccgctttctgccgcagtctccatgacatgaat
ccctcggagtgcgtgtcctcttcgcctagcccggactcgcccttcccacctcttgcaact
cctcggcagctctctgatgccgacaagctccgcaaagtcatctgtgagctcgtggagaca
gagcggacctatgtcaaagatctcaattgcctcatcgggagatatttaaccccactgcag
aaagagacctttctcactcaggatgagctggacgtactgtttgggaacttgccagaaatg
gtggagtttcaagttgagttcctcaagaccctggaagatgggactagattggttccagat
ctggagaagctggagagagtggatcagtttaagaaaatcctcttctccctgggaggctct
ttcctgtactatgcagaccgttttaaaatctacagtgctttctgcgccagccacaccaaa
gttccgaaggtcctcgtaaaggccaaaacggaccacgagttcaaggccttcctggacgag
cgcaacccaaagcagcagcactcttccaccctggaatcatacctgatcaaacccatccag
agggtgctgaagtatccactcctgctgaaggagctctactcgctcacggacccagacagt
gaggagcactaccacctggatgttgccatgaaagccatgaacaaagtcgccagccacatc
aacgagatgcagaagatccatgaggagtttggagcagtgttcgatctgctcatcaccgag
caaagtggtgaaaagaaagtggttgctgacttgtccatgggtgatctgttactccacacc
accgtgacctggatcaaccctccggcctccctggggaaatggaagaaggagccccagatg
gcaacatttgtgttcaaaatggcagttgtctttgtatgcaaggatgggtccaagcagaaa
aagaaaatgggtggctcccatcgagtgtccgtatcttcagatgaaaaagaccctttccga
ttccgtcacatgatccccactaacgcccttcaagttagatccttggccaattcagatggc
gagagctctgctgtgtgtgagattgtccacacaaagtcagagtcagagggacggccagag
aggacgtttcagctgtgctgtagctctccggagagtagaaaagacttcctgaaaacagtc
cattctatcttgagggaaaagcaccgccggcagctcctgaaaaccgagagtttacccctc
aaccagcagtatgtaccctttggaggaaagcgtctctgtgccctgaagggagcccgtcct
gtcataaatagagcagcatctgccccaaccaggactctaggaaggaggaagcttttacgc
aaccgcttcactatcgacacagacattgtttttgatggcgaacctgaacaagagctggct
tccccacaggagcccggctcagaccggctgcagcaggaggacaaaccaaatcagctgcag
tctgaattagcaggtgacacagaccgctgggtggaagaacagttcgacctagaggaatac
gaggaccgggaagaggtgaaggagacagacatcctgagtgacgaggatgatgagagctgt
cagacgcccggagcgcggtccgctgaggctgacctggaggcgcccgtcatggctttgtcc
ttggtgggtgaggaaaaggaagaaagcgagagccttaagtccccgacaggcagtgagaca
catgatctgaagctggtcgacacagggaagcagagcggtgcgaacaatgacgatgtggcg
gatcaaaagcatcaaacggagaggggtgagatttgggtacgacgggatccgtccgggtcc
tccccagcctga
DBGET
integrated database retrieval system
