Scophthalmus maximus (turbot): 118302102 Help Entry 118302102         CDS       T09850                                  Symbol traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism smau  Scophthalmus maximus (turbot) Pathway smau04010   MAPK signaling pathway smau04120   Ubiquitin mediated proteolysis smau04140   Autophagy - animal smau04144   Endocytosis smau04620   Toll-like receptor signaling pathway smau04621   NOD-like receptor signaling pathway smau04622   RIG-I-like receptor signaling pathway smau05132   Salmonella infection smau05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:smau00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     118302102 (traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     118302102 (traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     118302102 (traf6)    04140 Autophagy - animal     118302102 (traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     118302102 (traf6)    04621 NOD-like receptor signaling pathway     118302102 (traf6)    04622 RIG-I-like receptor signaling pathway     118302102 (traf6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     118302102 (traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     118302102 (traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:smau04131]     118302102 (traf6)    04121 Ubiquitin system [BR:smau04121]     118302102 (traf6) Enzymes [BR:smau01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      118302102 (traf6) Membrane trafficking [BR:smau04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     118302102 (traf6) Ubiquitin system [BR:smau04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     118302102 (traf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 TRAF6_Z2 zf-RING_5 U-box RING_XB3-XBAT31 zf-RING_11 TRAF3_RING zf-TRAF_2 zf-RING_6 DUF7310 Motif Other DBs NCBI-GeneID:  118302102 NCBI-ProteinID:  XP_035483854 LinkDB All DBs Position 4:3857345..3865503 Genome browser AA seq 575 aa AA seqDB search MACFDSNKGSLEEDSFDGAVGGELSSCALAMLEKERESLLSPSEGPGTLNSSSTSTSLQA ADPVQGYDVEFDPHLEPKYECPICLMALRNAVQTPCGHRFCKNCIEKSIRDTGQRCPVDN EMLTEDQLFPDNFAKREILSLTVRCPNSGCVDKMELRQLENHLAHCQFATEPCPQCQQSV RKSHLEEHTTVECQRRPMSCPDCVACFVYEDRELHEQQCPFANVKCHYCEMDLIRDQIES HCDTDCPKAPIACNFSTFGCKERMQRHNLAQHMQEFTQMHMWYMAEFLRGLSLNGTAPRS LRAHGPSASTEDQGAAASASASSSASGGPRGAASCSGSCAPAPPPPSEEMQRLREMDGRL VKQDHQLRELIILKETQAGQLAELRRRVSTLEDTVKELEAQQCRGIFVWRLKGFSAHLRN QEAGLPVVEHSPGFYTGCPGYKLCLRLHLQTPNALRCSNYISLFVHTMQGAFDAQLTWPF QGTIRLAILDQGPEGQHHMEVMETKPDLQAFQRPTIQRNPKGFGYVTFMHLHQLGQKAFV KDDTLLIRCEVTPRFDSMPHREGPAVQPRGPEASV NT seq 1728 nt NT seq  +upstreamnt  +downstreamnt atggcctgctttgatagcaataaggggagtctggaggaggacagctttgatggagctgtc ggcggagagctgtccagttgtgccttggcaatgctggagaaggagcgggaatccctcctc agcccgtcagagggccccgggaccctcaacagcagcagcacctccaccagtcttcaggcc gccgaccccgtccagggctacgacgtggaattcgacccgcacctggagcccaaatacgag tgccccatctgcctcatggcgctgaggaacgccgttcaaacaccctgtggccaccgcttc tgcaagaactgcatcgagaagtcaattcgtgacacgggacagagatgccctgtggacaac gaaatgctcacagaagatcagctgttccctgataactttgccaaacgggagattctgtca ctgacggttcgctgtccaaactccggctgtgttgacaaaatggagctacgacaactggag aatcatttggcgcactgtcagtttgcgacggagccctgcccacagtgccagcagtcggtg aggaagagccacttagaggagcacacgactgtcgagtgccaaaggagacccatgtcctgt ccagattgtgtggcctgctttgtttacgaggacagagagcttcacgagcagcagtgtccc tttgccaacgtcaagtgccactactgtgagatggatctcatcagagaccagattgaatct cattgtgatacagattgccccaaagcacctatcgcctgtaacttcagcacctttgggtgc aaggaaaggatgcagcgccacaacctggctcagcacatgcaggagttcacgcagatgcac atgtggtacatggcggagttcctgcgcggcctcagcctcaatggcaccgcgcccagatcc ctgcgggcgcacggaccatctgcgtcgaccgaggaccagggagccgcggcgtcggcgtcc gcctcttcctctgcctccggggggcccagaggagcagcgagctgcagcggcagctgtgct ccggctccgcctccgcccagcgaggagatgcagcggctccgggaaatggacggacggctg gtgaagcaggatcaccagctgcgtgagctcatcatcttaaaagaaacgcaggcaggccag cttgcggaactcaggcgcagggtgtcgacgctagaggacaccgttaaggagctggaggcc cagcagtgccgcggcatcttcgtgtggcgcctcaaaggtttctccgcccacctgcggaac caagaggccgggctgccggtggtggagcacagccccggcttctacacgggctgcccgggc tacaagctgtgtctgcgcttgcacctgcagacgcccaacgcgctgcgctgctccaactac atctcgctcttcgtgcacaccatgcagggggcgttcgacgcgcagctcacctggccgttc cagggcaccatccggctcgccatcctcgaccagggccccgagggccagcaccacatggag gtgatggaaaccaagcccgacctgcaggccttccagaggcccaccatccagcgcaacccc aagggattcggctacgtcaccttcatgcacctgcaccagctgggtcagaaagccttcgtc aaagacgacacgctgctcatccgctgcgaggtgacgccgcgctttgacagtatgcctcac cgcgaggggcccgccgtgcagcctcgaggacccgaggcatcggtttga

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