Scophthalmus maximus (turbot): 118307214
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Entry
118307214 CDS
T09850
Name
(RefSeq) exostosin-1a-like
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
smau01100
Metabolic pathways
Module
smau_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
118307214
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
smau01003
]
118307214
Enzymes [BR:
smau01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
118307214
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
118307214
Glycosyltransferases [BR:
smau01003
]
Glycan extension
O-Glycan
118307214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
118307214
NCBI-ProteinID:
XP_035485777
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Position
1:6193502..6227332
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AA seq
743 aa
AA seq
DB search
MQAKKRYLILFSAGACLILLFCFGGIQVPLSRRGPGRRDDRSLAGHHPAARWRRLPGLLQ
RFSSREQDWSDDRGEHMSPRQKRDASTGVYAGKRCRMESCFDFSLCERNGFKVYVYPQQK
GEKMSESYQNILSSIEGSRFHTPEPGQACLFVLSLDTLDRDGLSPQYVHSLRAKIQGLPP
WNGGKNHIIFNLYSGTWPDYTEDLGFDIGLAMLAKASISTENFRPNFDVSIPLFSKDHPR
TGGQRGYLKHNAIPPYRKYMLVFKGKRYLTGIGSDTRNALYHVHNSEDVVLLTTCKHGKD
WQKHKDARCDRDNAEYDKYDYREMLYNSTFCLVPRGRRLGSFRFLEALQAACVPVMLSNG
WELPFSEIIDWNTAAVIGDERLLLQIPSTVRSIHQDKILSLRQQTQFLWEAYFNSVEKIV
LTTLEIIQDRVLRHTSRSNLMWNSLPGGLFTLPQYSTHLRDFPFYYAKLGIKPSPKFTAI
IHVVTPLVSQSQPVMKLLVAVAKSQYCAQVIVLWNCDKPLPAKYRWPATSVPVIVIEGES
KMISSRFLPYDTIPTDAVLSLDEDTVLSTTEVDFALTVWQSFPDRIVGYPARSHFWDSNK
ERWGYTSKWTNDYSMVLTGAAIYHKYYHYLYTTYLPVSLKSMVDQMSNCEDILMNFLVSS
VSKLPPIKVTQKKQYKETMMGQSSRASRWADPDHFAQRQTCMNKFASWFGTMPLVHSQMR
LDPVLFKDQVSILRKKYRDIERL
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaaaaaacgctacttaattctcttctccgccggcgcgtgtctcatcctgttg
ttctgtttcggcgggatacaagtgccgctgtccaggcggggacccggccggcgcgatgac
cgcagcctcgccggtcatcaccccgcggcgcgctggcgtcgcctcccggggctcctgcag
cgcttcagctcccgggagcaggactggagcgacgaccgcggtgaacacatgtccccccgg
cagaagagggacgcgagcaccggcgtctacgcaggaaaacgctgcagaatggagtcctgt
tttgacttctccctctgcgagcggaatggcttcaaagtttacgtctacccccagcagaag
ggggagaagatgtccgagagttaccagaacattctgtcctcgatcgaaggctccaggttt
cacacaccggaaccgggacaggcgtgcctgtttgtcctgagtctggacacgctggaccgg
gacgggctttctccccagtatgtgcacagcctgagggcaaagatccagggccttcctccg
tggaacgggggcaaaaaccacatcatcttcaatttatactccggcacctggccggactac
acggaagacctgggcttcgacatcggcctcgccatgttggccaaggccagcatcagcacg
gagaacttccggcccaactttgacgtttccatacctcttttctctaaagaccaccccagg
acgggagggcaacgaggctacctgaaacacaatgccattcccccgtatcgaaagtacatg
cttgttttcaaggggaagaggtacctgactggaataggttcggacaccaggaacgctctg
taccacgtccataactcggaagacgtggtcctcctcaccacctgtaagcatgggaaggac
tggcagaagcacaaggatgcacgctgcgatagagacaacgcagaatatgacaaatatgac
tacagagagatgctgtacaactccacattctgtctggtgcctcgaggacgacggctgggt
tcctttcgcttcctggaggctctgcaggcagcttgtgttcccgtgatgctgagtaatggc
tgggagcttcccttctcggagatcattgactggaatacggcagctgtgattggggatgaa
agactgctattacagatcccctcaacagtgcgctccattcaccaggataagatcctgtcc
ctgagacagcagacccagttcctgtgggaggcctacttcaactctgtggagaagattgta
ctgaccacactcgagatcatccaggaccgggtgctgcggcacacctcgaggagcaacctc
atgtggaacagtctgcccgggggtctcttcaccctgccccagtactctacacacctgcga
gacttccctttctattacgctaagctgggtatcaagccatcccccaagttcacggcgatc
atccacgtggtgaccccgctggtgtcccagtctcagccagtcatgaagctgcttgtggct
gtggccaaatcccagtactgtgctcaggtgatagttctgtggaactgtgataagcctctt
cctgccaagtaccgctggcctgccacctcggtccctgtcattgtcatagaaggggaaagc
aagatgataagcagtcgtttcctgccctacgacaccatccccacagatgcagtgctcagt
ctggatgaggacacggtgctctccaccacagaggtggactttgccttgacagtgtggcag
agtttcccggaccgcattgtcggttacccagcccgcagccacttctgggacagcaacaag
gagaggtggggctacacgtccaaatggaccaacgactactccatggtgctgaccggggct
gccatctatcacaaatactaccactacttgtacacaacttaccttccggtcagtctgaag
tcgatggttgaccagatgtcaaactgcgaggacattctgatgaacttcctggtgtcgtca
gtctccaaactaccgcccatcaaggtcacccagaagaaacagtacaaggagaccatgatg
ggacagagctcccgggcgtctcgctgggctgacccggaccattttgcccagcgtcagacc
tgcatgaacaagtttgccagctggtttggcaccatgcccctcgtccactctcagatgagg
ctggacccggtcctgttcaaagaccaggtgtccatactgcggaagaagtacagggacata
gagaggctatag
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