Scophthalmus maximus (turbot): 118309550
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Entry
118309550 CDS
T09850
Symbol
iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118309550 (iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smau01007
]
118309550 (iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smau03016
]
118309550 (iars1)
Enzymes [BR:
smau01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
118309550 (iars1)
Amino acid related enzymes [BR:
smau01007
]
Aminoacyl-tRNA synthetase
Class I (U)
118309550 (iars1)
Transfer RNA biogenesis [BR:
smau03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
118309550 (iars1)
Prokaryotic type
Other AARSs
118309550 (iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
DUF4238
Motif
Other DBs
NCBI-GeneID:
118309550
NCBI-ProteinID:
XP_035487699
UniProt:
A0A8D3C3I8
LinkDB
All DBs
Position
6:9783919..9827755
Genome browser
AA seq
1268 aa
AA seq
DB search
MVEPVPESINFPSEEEKILKFWQDKDCFQECLKQSKNRPKYTFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNKQC
RNIVMRYSNEWENSVKRMGRWIDFDNDYKTLYPWFMETVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVIVNFPLVEDPDVSLIAWTTTPWTLPSNLALCVNP
EFIYVKVKDNTAGKTYIMMEARLGALFKSEGEYTLLDKFPGKMLKGKKYKPLFEYFSECG
EKGAFQVVMDNYVKEEEGTGVVHQAPYFGADDYRVCTEYKIIQRDQAPICPVDASGCFTS
EVTDFAGQYVKDADKNIIKWLKEKGRLINASSFKHNYPFCWRSDTPLIYKAVPSWFIRVE
HMVDKLLDNNGKCYWVPEFVGEKRFGNWLRDARDWAISRNRYWGTPIPIWVSDDFEEVVC
VGSMAELEELSGVKVTDLHRESIDGLTIPSRCGKGTLRRITEVFDCWFESGSMPYAQVHY
PFENRKEFEDTFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPGLIVQSYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVFLPWYNAY
RFLVQNVQRLQKEDEMRFLYNENTAKQSDNIMDKWIQSFTQSLIQFFKAEMDAYRLYTVV
PRLVKFVDMLTNWYVRTNRRRLKGESGTEDCLWALETLFSVLFSMCRLMAPLTPFITEMM
YQNLRHLIDPASVEDKDSGSIHYLMLPQVRESVIDKRIESAVCQMQSVIELGRVIRDRKT
LPVKYPLKEVVVIHQDPEALRDIQSLQKFILEELNVRQLTLSTDKDKYGIHLRAEPDHMV
LGKRLKGAFKAITASIKELTSEQLEAFQKSGSITVDGHELHEEDLRLMYTFNQNSDSAAQ
YEAHSDAQVLVLLDVSPDQSMVDEGVAREVINRIQKLRKKGHLVPSDEITVYYRCQPEGE
YLDSVIKAHTDFILATTKAPLLPFPVPNTASVIIAEKTQLKGSDLELTIVKRSSAPRVSL
NGPACTFVNLRVKVNNKEQEGVVLLENPRGDNRVDVDKLKKVCTSVFGTNNTKLRFFNGG
AELTSKTDLHALSGKTLSATSGPLSPGPVPTTDALLCPYVNLLLCNAQPAECQTGEVGTL
LLMNPMGQNGLDYSGLLSETAKVFGLRSRWLKLYLDQDLTQELPADSSVKSLDTKTLFVR
VLPTTAET
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccagtccctgaatccatcaactttccctctgaggaggagaagatcctgaag
ttttggcaagacaaggactgcttccaggaatgcctcaaacagtccaagaacaggcccaag
tacaccttctacgacgggcctccctttgccacgggtctaccccactatggtcacatccta
gccgggaccatcaaggacattgttacccgctttgcccaccagagcggcttccatgttgac
cggcgctttggctgggattgtcatgggctgcctgtggagtatgagattgataagacattg
gggatcaaagggcctgaagatgtggccaagatgggcattgctgagtacaacaagcagtgc
aggaacattgtcatgagatactccaacgagtgggagaattcagtgaagcgaatgggcagg
tggattgacttcgacaatgactacaagaccctctacccatggttcatggagactgtctgg
tgggtgttcaaacagttgtatgacaagggtctggtctaccgaggtgtcaaagtcatgcct
ttctccactgcctgcaacacccctctctccaactttgagtcccaccagaactacaaggat
gttcaggatccatctgtcatcgtcaacttcccactggttgaggatccggatgtctctttg
atcgcctggacgacaacaccctggacactgcctagcaacctggccctgtgtgtcaacccg
gagttcatatatgttaaagtcaaagataacaccgcaggcaagacctatattatgatggag
gccaggcttggagctctgtttaagtcagagggcgagtacacgctgctggacaaatttcct
ggcaagatgctgaaagggaaaaaatacaagcctctctttgagtacttttccgagtgtggg
gagaaaggagcgttccaggtggtgatggataactacgtcaaagaggaggagggcacagga
gtcgtccaccaggcaccttactttggagctgatgattacagggtgtgcactgaatacaag
atcatccagagggaccaggctccaatctgccctgtggacgcctcgggctgcttcacgtca
gaggtcaccgactttgcgggacagtatgtcaaagatgctgacaagaacatcatcaagtgg
ctgaaggagaagggccgcctcatcaatgccagcagtttcaaacataattaccccttctgc
tggaggtctgacacgcccctgatctacaaagccgtccccagctggtttatccgagtggag
cacatggtcgacaaattactagacaacaatggaaaatgctactgggttccagagtttgtt
ggtgagaagcgtttcgggaactggctgagagacgctcgtgactgggctatttcaaggaac
cgttactggggaacaccgatcccgatttgggtcagcgatgacttcgaagaggtggtgtgt
gtggggtccatggctgaactggaggaactgagcggagtcaaagtaactgatctgcatcgg
gagagcattgacggtctaacaatcccgtcgcggtgtggtaagggaacactgcggaggatc
acagaggtgtttgactgctggtttgagagcggcagcatgccatacgcacaggtccactac
cccttcgaaaacaggaaggagtttgaggacactttccctgcagatttcatcgctgaaggc
atcgaccagacaaggggatggttctacaccctgttggttctctccacagccctgttcggc
aaaccgcccttcaagaatgtcattgttaatggcttggtactggctagcgatggacagaag
atgagcaagcgcaagaagaactatccggatccgggactgatagtgcagagctatggagcc
gatgccctcagactgtacctcatcaactctcctgtcgtgagagcagagaacctgcgcttc
aaagaggagggcgtgcgggatgtgttgaaagacgtcttcctgccgtggtataatgcctat
cgctttctggtgcagaacgttcaaaggttacagaaggaggatgagatgcggtttctgtac
aatgagaacacggcgaagcagagtgacaatatcatggacaaatggattcagtccttcaca
cagtccctcatccagttcttcaaggcagagatggatgcttaccgcctctacactgtcgtg
cctcgcctggtaaagtttgtggacatgctaaccaactggtacgtcaggaccaacagacgc
cgtctgaagggagagagtggcactgaggactgcctgtgggcgctggaaaccctcttcagt
gttctgttctccatgtgcaggctgatggctccactcacacccttcattacagagatgatg
taccaaaatctgcgtcacctcatcgaccccgcctctgtcgaagacaaggactccggaagc
attcactatctcatgctgccacaagtcagggagagtgtgattgataagcgcattgagagt
gccgtctgtcagatgcagtctgtgatcgagctgggcagagtgatccgtgacaggaagacc
ctgcccgtcaagtaccctttgaaggaggtggtagttattcaccaggatccagaggctctg
agagacatccagtcccttcagaaattcatcctcgaagagctcaatgtgcgtcagttaaca
ctgtcaacagacaaggacaagtacggtatccacctgagagccgagccagaccacatggtg
ttgggcaagagactaaagggggccttcaaagccatcactgcttctatcaaggagctcacc
agcgaacaactagaggccttccagaagtcaggatccatcacggtggacggccacgagctt
cacgaggaggacctgaggctgatgtacaccttcaaccagaactcagactctgctgcccag
tatgaagcacactcggacgcgcaggttctggtgctgttggacgtctccccagaccagtcc
atggtggatgaaggcgtcgcccgagaagtcatcaaccgcattcagaaactacgcaagaag
ggtcatttggtgccgtcagatgagataaccgtgtactaccgctgccagccagagggggag
tacttggactctgtgatcaaggctcacactgacttcatcctggcgaccaccaaagctcca
cttctgcctttccctgttcccaacactgccagtgtcatcatagcggagaagactcagttg
aagggttcagacttggagttaaccattgtaaagagatcttcagcccctcgtgtctctctg
aatggacctgcttgcacctttgtgaatctgagggtgaaggtcaacaacaaagaacaagag
ggggtggtgctgctggagaaccccagaggagacaacagagtagacgtggacaagctgaag
aaagtctgcaccagcgtctttggaacaaacaacaccaagctcagattcttcaatggcggg
gctgagttgaccagcaaaactgaccttcacgctctgagtggtaaaactttgtcagcgacc
tcgggccccttgtcccccggccccgtccccaccaccgacgccctcctgtgtccatacgtg
aacctgctgctctgcaacgcacagccggctgaatgccagacaggagaggtgggcaccctc
ctgctgatgaatccaatgggacagaatgggctggactactcgggcctcctgtctgagact
gccaaggttttcggccttcgcagcagatggctcaagctctacctggaccaggacctcacc
caggagctgccggcggattcatctgtaaaatctctagacaccaaaactctgtttgtgaga
gttcttccaacaactgccgaaacataa
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