Scophthalmus maximus (turbot): 118311865
Help
Entry
118311865 CDS
T09850
Symbol
smcr8b
Name
(RefSeq) guanine nucleotide exchange protein smcr8b isoform X1
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118311865 (smcr8b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118311865 (smcr8b)
Membrane trafficking [BR:
smau04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
118311865 (smcr8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
118311865
NCBI-ProteinID:
XP_035491847
LinkDB
All DBs
Position
8:4766343..4776523
Genome browser
AA seq
897 aa
AA seq
DB search
MIGSPDLLAFTGTEGFGDGLGEEEQGGAGLPEELSVPLLPASPPWTSSARFHRDFVLVAE
FSEQVGPKPVLTIPDDPRVVGSFDLNHFSVRLMSVDYQASGPVHASHASPSPRLNFSEDS
KVILGDSAEDTFAYVHHVTLYDLEARGMVRPFCMAYVCSDQAKLMENFSELSACFSQASD
SLKTGNRQAFSMELQRKLQELEYRRLTLEQETVNGFTDDGDKADDLDAVERSISTHRDLL
RQVTSYPNRKLKQPDFLPYDPADSLADPTALPPPEPRPSTSASSCRSERSLKSLQELCNA
YFLSLMKDQLADTERRLRGDRSALRTARVSRSLSRKLALTNFLFEHWSAENEEEEEEEDN
AEAEPPRGGEMFRAEPMSLESFYSCVEEIPIKLEAGEAGEDGAVSSDSSVVMEMTGSVSS
GDSIEVLGTEKSYRTQRVVDGSDGKAETPALPAEASVRRVATDAGARRGRAYARRANSND
SIEVLSTTESIFPDDLTAITEEEAEHQPLSNGFDGEEVTPTECKPDNVLLNAATVGNETE
SKLPAEERDVDKEEPVKQITDRVVKYFKKNHVQGDDGRKEPSNMLQAHKAGDVTPKWPEV
HQPVRSVPDLRVNLPPPVAPPAEADRWTPPCAPLRLLSVDEASDCTSFTGSSDPPTPTQN
VINRGHARCSDRRRRKAGLRALRFVKQNSFSHHALFCLLSGRPLVVIGGDQSLVRKLVDA
LSLFLPAPGPDGNAVTLCLSTPLQLTDLLTWRLIGIHRSPSGSSSSILHSLTRYSRYLAL
LDLDQRTLRCPSYSGSLVGRLADPRSGIGRGVTYLLHLESCLTALVNQALLYTFHGGKDG
AGGRDFLLARGFCSSENDVRVVSFLSDLIRQRHAGRGPAVLRFSYCSVQLHRNTYTT
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggtccccggacctgttggccttcaccggcaccgagggcttcggggacgggctg
ggggaggaggagcaggggggcgccggtctcccggaggagctctccgtccccctcctgccc
gcctccccgccctggacctcctccgcccgcttccaccgtgacttcgtgctggtggccgag
ttctcggagcaggtgggtccgaagccggtgctgacgataccggacgaccccagagtcgtc
ggctccttcgacctcaaccacttctccgtccgcctcatgtccgtggactaccaggcgtcc
ggccccgtccacgcctcccacgcctcgcccagcccccgcctcaacttcagcgaggactcc
aaggtgatcctgggcgactcggccgaggacacgttcgcctacgtgcaccacgtgaccctg
tacgacctggaggcgcggggcatggtgcgtcccttctgcatggcctacgtgtgctcggac
caggccaagctgatggagaacttctccgagctgtcggcgtgcttctcccaggcgtccgac
agcctcaagacggggaacaggcaggcgttctctatggagctgcagaggaaactgcaagag
ctcgagtataggcggttgaccttggagcaggagacggtgaatggcttcacagacgatgga
gacaaagccgacgatcttgatgctgtggagcgttcgatctcgactcaccgggacctcctg
cgccaggtcacgtcctacccaaacaggaagctcaagcagcccgacttcctgccctacgac
ccagcggactcgctcgccgatcccaccgctctgccgcctcccgagccgcgtccctccacg
tccgcctcctcctgcaggtcagagcgatctctgaagtcgctgcaggagctctgcaacgcc
tacttcctctccctgatgaaggaccagctggcggacaccgagcgccgcctgcgaggtgac
aggagcgccctgcgaaccgcccgcgtttcacgctcgctgtccaggaagctcgccctcacc
aacttcctgtttgagcattggagcgcggagaacgaagaggaggaggaggaggaggataac
gccgaggcggagccaccgaggggtggcgagatgtttcgggcggaaccgatgagcctggag
tcgttctactcttgtgtggaggagatcccgatcaaactggaggcgggggaggcgggggag
gacggggcggtgagctccgactccagcgtcgtcatggagatgacgggaagcgtgagcagc
ggcgacagcatcgaagtgctcggcaccgagaaatcctacaggacgcagcgtgtcgtcgac
ggatccgacggcaaagcagaaacaccggctctgccggcggaggcctccgtcagacgagtc
gcgacagacgcgggcgccaggcgcgggcgagcgtacgccaggcgagccaacagcaatgac
agcatcgaggtcctgagcaccaccgagtccatctttcccgacgacctcaccgccatcacg
gaggaagaggcggagcaccagccgctgagcaacggcttcgacggcgaggaggtgacgccg
acagagtgtaaacccgacaacgtcctattgaacgcagctactgtaggaaacgagactgag
agcaaactgcctgccgaggaacgtgatgttgataaagaagagcctgtaaagcagatcacc
gatcgggtcgtcaagtattttaagaagaatcatgtccagggggacgacggtcggaaggag
ccgtccaacatgctgcaagctcacaaagccggggacgtgacgccaaagtggcctgaagtc
caccagccggtgcggtcggtgccggacctccgtgtgaaccttccccctcccgtcgctcct
ccggcggaggccgaccgctggactccgccctgcgcccccctccggctgctgagcgtcgac
gaggcgtccgactgcaccagcttcacgggctcctcggaccctcccacccccacccagaac
gtcatcaatcgcggccacgcccgttgctcggacaggaggaggaggaaggccggtctccga
gccctccggttcgtcaagcagaactccttctcccatcacgccctgttctgtctcctgagc
ggccggccgctggtcgtcatcggcggagaccagagtctggtccggaagctggtggacgct
ctgagtctcttcctgccggcgcccggtcctgacgggaacgccgtgacgctgtgtctgtcc
acgcctcttcagctgaccgacctgctcacctggaggctgatcggaatacacagatcgccc
tccggctcctcgtccagcatccttcactctctgacccgctacagtcggtacctggccctg
ctggaccttgaccagaggaccctgcgctgtccgtcgtactccggctccctcgtcggccga
ctggccgatcctcgcagcggcatcggccgcggcgtcacctacctgctgcacctggagagc
tgcctgacggcgctggtcaaccaggcgctgctgtacacgtttcacggagggaaggacggc
gcgggcgggagggacttcctgctcgcgcgaggattctgcagcagcgagaacgacgtgaga
gtcgtgagcttcctgtcggacctcatcagacagcgccacgcgggacgtggacccgcggtt
ttaaggttctcctactgctcggtgcagctgcaccggaacacgtatacaacatga
DBGET
integrated database retrieval system