KEGG   Scophthalmus maximus (turbot): 118311865
Entry
118311865         CDS       T09850                                 
Symbol
smcr8b
Name
(RefSeq) guanine nucleotide exchange protein smcr8b isoform X1
  KO
K23611  guanine nucleotide exchange protein SMCR8
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:smau00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    118311865 (smcr8b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smau04131]
    118311865 (smcr8b)
Membrane trafficking [BR:smau04131]
 Autophagy
  Other autophagy associated proteins
   Rab associated proteins
    118311865 (smcr8b)
SSDB
Motif
Pfam: Folliculin
Other DBs
NCBI-GeneID: 118311865
NCBI-ProteinID: XP_035491847
LinkDB
Position
8:4766343..4776523
AA seq 897 aa
MIGSPDLLAFTGTEGFGDGLGEEEQGGAGLPEELSVPLLPASPPWTSSARFHRDFVLVAE
FSEQVGPKPVLTIPDDPRVVGSFDLNHFSVRLMSVDYQASGPVHASHASPSPRLNFSEDS
KVILGDSAEDTFAYVHHVTLYDLEARGMVRPFCMAYVCSDQAKLMENFSELSACFSQASD
SLKTGNRQAFSMELQRKLQELEYRRLTLEQETVNGFTDDGDKADDLDAVERSISTHRDLL
RQVTSYPNRKLKQPDFLPYDPADSLADPTALPPPEPRPSTSASSCRSERSLKSLQELCNA
YFLSLMKDQLADTERRLRGDRSALRTARVSRSLSRKLALTNFLFEHWSAENEEEEEEEDN
AEAEPPRGGEMFRAEPMSLESFYSCVEEIPIKLEAGEAGEDGAVSSDSSVVMEMTGSVSS
GDSIEVLGTEKSYRTQRVVDGSDGKAETPALPAEASVRRVATDAGARRGRAYARRANSND
SIEVLSTTESIFPDDLTAITEEEAEHQPLSNGFDGEEVTPTECKPDNVLLNAATVGNETE
SKLPAEERDVDKEEPVKQITDRVVKYFKKNHVQGDDGRKEPSNMLQAHKAGDVTPKWPEV
HQPVRSVPDLRVNLPPPVAPPAEADRWTPPCAPLRLLSVDEASDCTSFTGSSDPPTPTQN
VINRGHARCSDRRRRKAGLRALRFVKQNSFSHHALFCLLSGRPLVVIGGDQSLVRKLVDA
LSLFLPAPGPDGNAVTLCLSTPLQLTDLLTWRLIGIHRSPSGSSSSILHSLTRYSRYLAL
LDLDQRTLRCPSYSGSLVGRLADPRSGIGRGVTYLLHLESCLTALVNQALLYTFHGGKDG
AGGRDFLLARGFCSSENDVRVVSFLSDLIRQRHAGRGPAVLRFSYCSVQLHRNTYTT
NT seq 2694 nt   +upstreamnt  +downstreamnt
atgatcgggtccccggacctgttggccttcaccggcaccgagggcttcggggacgggctg
ggggaggaggagcaggggggcgccggtctcccggaggagctctccgtccccctcctgccc
gcctccccgccctggacctcctccgcccgcttccaccgtgacttcgtgctggtggccgag
ttctcggagcaggtgggtccgaagccggtgctgacgataccggacgaccccagagtcgtc
ggctccttcgacctcaaccacttctccgtccgcctcatgtccgtggactaccaggcgtcc
ggccccgtccacgcctcccacgcctcgcccagcccccgcctcaacttcagcgaggactcc
aaggtgatcctgggcgactcggccgaggacacgttcgcctacgtgcaccacgtgaccctg
tacgacctggaggcgcggggcatggtgcgtcccttctgcatggcctacgtgtgctcggac
caggccaagctgatggagaacttctccgagctgtcggcgtgcttctcccaggcgtccgac
agcctcaagacggggaacaggcaggcgttctctatggagctgcagaggaaactgcaagag
ctcgagtataggcggttgaccttggagcaggagacggtgaatggcttcacagacgatgga
gacaaagccgacgatcttgatgctgtggagcgttcgatctcgactcaccgggacctcctg
cgccaggtcacgtcctacccaaacaggaagctcaagcagcccgacttcctgccctacgac
ccagcggactcgctcgccgatcccaccgctctgccgcctcccgagccgcgtccctccacg
tccgcctcctcctgcaggtcagagcgatctctgaagtcgctgcaggagctctgcaacgcc
tacttcctctccctgatgaaggaccagctggcggacaccgagcgccgcctgcgaggtgac
aggagcgccctgcgaaccgcccgcgtttcacgctcgctgtccaggaagctcgccctcacc
aacttcctgtttgagcattggagcgcggagaacgaagaggaggaggaggaggaggataac
gccgaggcggagccaccgaggggtggcgagatgtttcgggcggaaccgatgagcctggag
tcgttctactcttgtgtggaggagatcccgatcaaactggaggcgggggaggcgggggag
gacggggcggtgagctccgactccagcgtcgtcatggagatgacgggaagcgtgagcagc
ggcgacagcatcgaagtgctcggcaccgagaaatcctacaggacgcagcgtgtcgtcgac
ggatccgacggcaaagcagaaacaccggctctgccggcggaggcctccgtcagacgagtc
gcgacagacgcgggcgccaggcgcgggcgagcgtacgccaggcgagccaacagcaatgac
agcatcgaggtcctgagcaccaccgagtccatctttcccgacgacctcaccgccatcacg
gaggaagaggcggagcaccagccgctgagcaacggcttcgacggcgaggaggtgacgccg
acagagtgtaaacccgacaacgtcctattgaacgcagctactgtaggaaacgagactgag
agcaaactgcctgccgaggaacgtgatgttgataaagaagagcctgtaaagcagatcacc
gatcgggtcgtcaagtattttaagaagaatcatgtccagggggacgacggtcggaaggag
ccgtccaacatgctgcaagctcacaaagccggggacgtgacgccaaagtggcctgaagtc
caccagccggtgcggtcggtgccggacctccgtgtgaaccttccccctcccgtcgctcct
ccggcggaggccgaccgctggactccgccctgcgcccccctccggctgctgagcgtcgac
gaggcgtccgactgcaccagcttcacgggctcctcggaccctcccacccccacccagaac
gtcatcaatcgcggccacgcccgttgctcggacaggaggaggaggaaggccggtctccga
gccctccggttcgtcaagcagaactccttctcccatcacgccctgttctgtctcctgagc
ggccggccgctggtcgtcatcggcggagaccagagtctggtccggaagctggtggacgct
ctgagtctcttcctgccggcgcccggtcctgacgggaacgccgtgacgctgtgtctgtcc
acgcctcttcagctgaccgacctgctcacctggaggctgatcggaatacacagatcgccc
tccggctcctcgtccagcatccttcactctctgacccgctacagtcggtacctggccctg
ctggaccttgaccagaggaccctgcgctgtccgtcgtactccggctccctcgtcggccga
ctggccgatcctcgcagcggcatcggccgcggcgtcacctacctgctgcacctggagagc
tgcctgacggcgctggtcaaccaggcgctgctgtacacgtttcacggagggaaggacggc
gcgggcgggagggacttcctgctcgcgcgaggattctgcagcagcgagaacgacgtgaga
gtcgtgagcttcctgtcggacctcatcagacagcgccacgcgggacgtggacccgcggtt
ttaaggttctcctactgctcggtgcagctgcaccggaacacgtatacaacatga

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