Scophthalmus maximus (turbot): 118313432
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Entry
118313432 CDS
T09850
Symbol
traf2a
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04010
MAPK signaling pathway
smau04137
Mitophagy - animal
smau04141
Protein processing in endoplasmic reticulum
smau04210
Apoptosis
smau04217
Necroptosis
smau04621
NOD-like receptor signaling pathway
smau04622
RIG-I-like receptor signaling pathway
smau04920
Adipocytokine signaling pathway
smau05132
Salmonella infection
smau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118313432 (traf2a)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118313432 (traf2a)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118313432 (traf2a)
09143 Cell growth and death
04210 Apoptosis
118313432 (traf2a)
04217 Necroptosis
118313432 (traf2a)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118313432 (traf2a)
04622 RIG-I-like receptor signaling pathway
118313432 (traf2a)
09152 Endocrine system
04920 Adipocytokine signaling pathway
118313432 (traf2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118313432 (traf2a)
09171 Infectious disease: bacterial
05132 Salmonella infection
118313432 (traf2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118313432 (traf2a)
04121 Ubiquitin system [BR:
smau04121
]
118313432 (traf2a)
Enzymes [BR:
smau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118313432 (traf2a)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
118313432 (traf2a)
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
118313432 (traf2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
Sina_ZnF
zf-RING_5
zf-RING_4
zf-C3HC4_4
zf-RING_6
MATH
TRAFD1-XIAF1_ZnF
zf_C2HC_14
Motif
Other DBs
NCBI-GeneID:
118313432
NCBI-ProteinID:
XP_035494741
EnsemblRapid:
ENSSMAG00025015740
LinkDB
All DBs
Position
19:353609..369517
Genome browser
AA seq
599 aa
AA seq
DB search
MLATDAKITLSSVCSPEHTPMSYPDIVQGEMMAAQEPSPPSSLEGNKPGFPKKILSNNLK
DKHLCNSCQKILRRPLQAQCGHRFCSFCFNNTVSSGPQKCSACIKEDLFEEHTSILKQGG
AFPDNAARREVEALAAVCPNEGCTWMGTIKEFEASHEGDCDFMIILCPSCKELMRANEQE
RHNERECPERTLNCKYCKEPFLLKNIKAHDEICPKYPMICEGCAKKKIPREKYVDHIKFC
SKFKSPCRFHVVGCDTSVEKEKIHDHERQCSYEHLNLLLHFIMGIKVSLESLQPQSLDVT
SHKLQELHQSLRELEQKMSQLGGGYTAPMQGACAPTLFTSFTPLPSSVGATLELQLQGEK
TKVVELSRRCQELELKVSTFENIVCVLNREMEYSCTTMEAYNHQHRLDQDKIEILNNKVR
QLERTVSLRDLSIVEMEGKMREMSAATYDGIFVWKIWDFTKKRQDAVAGRAPAMFSPAFY
TSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQNNREH
IIDAFRPDISSSSFQRPVSDMNIASGCPLFCSLSKLDSKNSYIRDDTIFIKAIVDLTGL
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgactgacgccaagatcacactgagcagcgtttgctctcctgaacacacccca
atgagttaccccgatattgttcagggggaaatgatggctgcacaggaaccgtctccacca
tcttccttggaaggcaacaaaccgggcttccctaagaaaattttgtccaacaacctcaaa
gacaagcatctgtgcaattcatgccaaaagatcctgaggaggcccctgcaagcccagtgc
ggtcaccgcttctgctcgttctgtttcaacaacactgtgagttctggaccacagaaatgc
agtgcttgcatcaaagaagacttattcgaggaacacacctctatcctcaagcaaggtggt
gctttcccagataatgcagcgcggagagaagttgaagccttggcggctgtctgtcccaat
gagggatgcacatggatgggaactatcaaagaatttgaggcaagccatgagggtgactgt
gacttcatgatcatcctgtgtccttcctgtaaagagctgatgagagccaacgaacaggag
cggcacaatgagagagaatgtccagagaggacactcaactgcaaatactgcaaagaaccc
ttcttgttgaagaacatcaaggctcatgatgaaatatgtccaaagtatccaatgatttgt
gaaggttgtgcaaagaaaaagatccccagagaaaagtatgtggaccatattaagttctgc
agtaaatttaaatcaccatgcagatttcatgttgttggctgcgacacatctgtggagaaa
gagaagattcatgatcatgagcgtcagtgttcctatgaacacctaaacctgctattgcat
ttcatcatgggcatcaaggtgagccttgagagcctgcagccccagagcctagatgtgacc
agccacaagctacaggagctccaccagtccctcagggagctggagcagaagatgagccag
ctgggtgggggttacactgctcccatgcagggtgcatgtgccccgaccctgttcacatcc
ttcaccccactgcccagctctgtgggtgccaccctggagctgcagctccagggcgaaaag
accaaggtagtggagctgagccggcgctgccaggagctggagctcaaagtgagcacgttc
gagaacatcgtctgcgtcctcaaccgagagatggagtactcctgcaccaccatggaggcc
tacaatcatcaacaccgactggaccaggacaagatcgagatcctcaacaacaaggttcgt
cagctggagaggactgtgagtctgagagacctgtccatcgtggagatggaagggaaaatg
agggagatgtctgctgccacgtatgacggcatctttgtctggaagatctgggatttcacc
aaaaagaggcaggatgccgtggctggccgtgccccagctatgttctctccagccttttat
accagtaaatatggctacaagatgtgcttgcggatctacctgaatggtgacgggacaggc
cgaggcacccacttgtctctgttctttgtggtgatgagaggacacagcgacgcactcctc
aagtggccttttaatcagaaggtcaccctaatgctgcttgaccagaacaacagagagcac
ataattgatgccttccgtcccgacatctcctcctcgtccttccagaggcccgtcagtgat
atgaacatcgccagcggctgccctctcttctgttcactctccaaactggactctaaaaac
tcctacatacgggacgacaccatctttatcaaggccattgtagaccttacaggactctag
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