Scophthalmus maximus (turbot): 118313817
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Entry
118313817 CDS
T09850
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau00310
Lysine degradation
smau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118313817 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118313817 (prdm6)
03036 Chromosome and associated proteins [BR:
smau03036
]
118313817 (prdm6)
Enzymes [BR:
smau01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
118313817 (prdm6)
Transcription factors [BR:
smau03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
118313817 (prdm6)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
118313817 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2H2_11
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
118313817
NCBI-ProteinID:
XP_035495614
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Position
19:1673136..1726996
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AA seq
625 aa
AA seq
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MLKPGGDPSGSAFLKVDPSYLQHWQQLFPQAQLKAPLVPPPPHPDRLSLPVDGLRPSRLH
SHLLASTHCSSSSSSTSAAPSSSSSSSSSSAALTPSSSSSLSQLPVPQQIALFGQALAPV
QCAGPGGGDLLVVVPPDNQLGHNLHQAKEQSCGGVGVGVVSSSVKSGGGGGEDGGGGKGA
STRFKLTSEQLDYYLYGQQRMEIIPLSNHTGESNNRCDMCADNRNGECPMHGPLHSLRRL
VGTSSSAAPVTLPDVPDWLRDLPREVCLCTSTVPGLGYGICAAQRIPQGTWIGPFQGISL
LVDKLQSGAARNTRHLWEIYDAEGTLQHFVDGNDPSKSSWMRYIRCARHCGEQNMMVVQY
RSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQCVAQDENLNVPATVVEAMTRQESLQ
SFSKSGKPSSSSSSSSSSSSTLMRSMVFPHSPCSRTFSLLDKVGVGIPSESSFGHLGSKN
QRILASPTSTSQLSSEFSDWHLWKCGQCFKTFTQRILLQMHVCPQNPDRPYQCGHCSQSF
SQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCDRSFTQAT
QLSRHQRLPNECKPVNESSESIEVD
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagccggggggcgacccgagcggctcggccttcctgaaggtggacccgtcctac
ctgcagcactggcagcagctcttccctcaggcgcagctcaaggcgccgctggtcccgccg
ccgccgcatcccgaccgcctctccctccccgttgacggcctgcgcccgtctcgcctgcac
agccacctgctggcctccacacactgctcctcctcctcctcttctacctcagcagctcct
tcttcttcttcttcttcttcttcttcgtcagcggctctcaccccgtcctcgtcctcctcc
ctgtcccagctgcccgtgccccagcagatcgctctctttgggcaggcgctggccccggtg
cagtgcgccgggcccggaggaggagacctgctggtggtcgtccccccggacaaccagctg
ggccacaacctgcatcaggccaaagagcagagctgtgggggggtgggggtgggggtggtg
tcgtccagcgtgaagagcggcggtggcggcggcgaggacggcggcggcgggaaaggagcg
agcaccaggttcaaactgacgtcggagcagctggactactacctgtacggacagcagagg
atggagatcatccccctgagcaaccacacgggagagagcaacaaccgttgcgacatgtgc
gccgacaacaggaacggcgagtgtccgatgcacgggcccctgcactcgctgcggcgcctc
gtcggcaccagcagctcggcggcgcccgtcaccctgccggacgtccccgactggctcagg
gatctgccccgggaggtgtgtctgtgcaccagcaccgttcccggtctgggctacgggatc
tgtgcggctcagcggattcctcagggaacctggatcggaccgtttcagggaatctctctg
ctggtggacaagcttcagtcgggagcggcgaggaacacgaggcacctgtgggagatctac
gacgcggagggaacgttgcagcacttcgtcgacggcaacgatcccagtaagtcgagctgg
atgaggtacatccgctgtgcccgacactgtggggagcagaacatgatggtggtccagtac
aggtcgtgtatcttctacagagcctgtatggacatcccccgagggaccgagctgctggtc
tggtacaacgactcctacacgtccttcttcgggatcccgctgcagtgcgtcgctcaggac
gaaaacttaaacgtcccagccacagtggtggaggccatgaccaggcaggagtccctccag
tccttcagcaagagtggcaaaccctcctcctcgtcctcgtcttcctcctcctcctcctcc
accctcatgcgctccatggtcttcccccactccccgtgctcaaggactttctccctgttg
gacaaggtcggggtcgggattccgtcggagtcgagtttcggccatctggggtcgaagaac
cagcggatcctggcgagtccgacctccactagtcagctgagcagcgagttcagcgactgg
cacctgtggaaatgtggccagtgcttcaaaaccttcacccagaggatcctgctgcagatg
cacgtctgtccgcagaaccccgacaggccgtaccagtgtggtcactgctcccagtccttc
tcgcagccgtccgagctgcggaaccacgtggtgactcactccagcgaccggcccttcaag
tgcggatactgcggccgagcgttcgccggcgccacgacgctcaacaaccacatccgcacg
cacacgggagagaagccgttcaagtgcgagcgatgcgaccgcagcttcacgcaggcgact
cagctcagccgccaccagcgacttcccaacgagtgtaaaccagtgaacgagagcagcgag
tccatcgaggtggattaa
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