Scophthalmus maximus (turbot): 118315053
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Entry
118315053 CDS
T09850
Symbol
si:ch73-22o12.1
Name
(RefSeq) nectin-2 isoform X1
KO
K06531
poliovirus receptor-related protein 2
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03266
Virion - Herpesvirus
smau04514
Cell adhesion molecule (CAM) interaction
smau04517
IgSF CAM signaling
smau04520
Adherens junction
smau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
118315053 (si:ch73-22o12.1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118315053 (si:ch73-22o12.1)
04517 IgSF CAM signaling
118315053 (si:ch73-22o12.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
118315053 (si:ch73-22o12.1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118315053 (si:ch73-22o12.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smau04515
]
118315053 (si:ch73-22o12.1)
04090 CD molecules [BR:
smau04090
]
118315053 (si:ch73-22o12.1)
Cell adhesion molecules [BR:
smau04515
]
Immunoglobulin superfamily
Nectin family
118315053 (si:ch73-22o12.1)
CD molecules [BR:
smau04090
]
Proteins
118315053 (si:ch73-22o12.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
V-set
ig
Ig_3
I-set
Ig_2
TM_ErbB1
DUF4342
ChitinaseA_N
Aminotran_3
Motif
Other DBs
NCBI-GeneID:
118315053
NCBI-ProteinID:
XP_035497887
LinkDB
All DBs
Position
1:14455208..14529728
Genome browser
AA seq
531 aa
AA seq
DB search
MARRDARNWRDCTKLVGLLCLAASMLTEHGAAGQRVKVEPEVLSYPGQTVNLRCAFTDAT
GIQLTMALWLYETKDGDRINIAVFHPKYEPNYPDSPLKGRVSFSPSPPNLASPSIQISDV
RMTDEGKYICDYATYPIGNEQGFTQLVMLAKPQNAASIVTVEAGTKPVVVARCESVDGRP
PSQISWVTAANGNGTTVSKPGKDNTVTVTSEYRMVPTAADNGKDLSCVVSHRTQVKPESF
PLKLAVQYAPQVTIVGYDNNWYVGRTNVMLTCQATGNPVPISVQWKTMSGELPDTVQITG
NELKVLKVDEAVNTTFVCEVKNRIGTSKDQVTAIVREPSENPSNAGVVAGAVIGSLLALL
LVAALIAVLVTRSRRQQQGYRANGGSDMKTRIFGGGKKASKNGTSGGAGSGGVGGGNNNG
PIYVYNESSSHHGLGEKNNHHQPLTMGSRPDVVTTAPSAQDILLSSELDDAERRKFDELE
EDERYDHFTGGAPILQLRPHNDQEDMIGDYLDDDMESQRDGSVISRTAVYV
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcgagacgcgacgcccgaaactggcgtgactgcacaaaactggtcgggctgctctgc
ctggccgcgtcgatgctcacagaacacggagcggcaggtcagcgagtgaaggtggagcca
gaggtcttgtcgtatcctggccagacagtgaacctgcgctgtgccttcactgatgctact
ggcattcagctgacaatggccttgtggctgtacgagacgaaggacggagataggatcaac
atcgctgtatttcatcccaaatatgagcccaactaccctgactcgcctctgaagggcagg
gtcagcttctcgcccagccccccaaacctggccagcccttccatccagattagcgacgtg
aggatgaccgatgaggggaagtacatctgcgattatgctacctacccaatcggcaacgag
cagggcttcacccaacttgtcatgctggctaagcctcagaacgctgcttccattgtaaca
gtggaggcgggcactaagccggtcgtggtggcacgctgcgagtccgtagatggccgcccc
ccttcgcagatatcctgggtgaccgcagccaatggcaatggcacaacagtgtcgaagccg
ggcaaagacaacaccgtgacagttaccagcgagtaccgcatggttcccacagcagcagac
aacgggaaagacctcagttgtgtggtttcgcacaggacccaagtcaaacctgaaagcttc
ccattgaagcttgcagttcaatacgcccctcaggtgactatagtgggttatgacaataat
tggtacgttggtcgcacaaatgtgatgctcacctgccaagcaactggaaaccctgtcccg
atctctgtccagtggaagacaatgtcaggagagctgccagacacggtgcagatcacaggc
aacgagctgaaggtgctgaaggtggacgaggctgtcaacaccacttttgtctgtgaggtc
aagaaccgcatagggaccagcaaggatcaggtcacagccattgtcagagagccctcagag
aacccatccaatgccggcgtggtggcgggagctgtgattggctccctgctggccctcctt
ttggtcgctgctctcattgccgtgctcgtgacccgtagccgcaggcaacagcaaggttac
cgcgccaatggcggcagtgacatgaagacgcgcatatttggcggtggcaagaaggccagc
aagaatggcacaagtggaggtgcagggagcggcggagtcggaggcggtaacaacaacggg
cccatctatgtttacaacgaaagctcatcccaccacggcctcggagagaaaaacaaccac
caccagccgctcaccatgggaagtcggcctgacgttgtcaccactgcacccagcgcccaa
gacatcctgttaagcagcgaattagacgacgcagagaggaggaagttcgatgagctggag
gaggacgagcggtatgaccacttcactggaggcgcccccatccttcagcttcgcccacac
aatgaccaggaggatatgattggagattacctggatgatgacatggagtcccagcgtgat
ggctccgtcatctcacggactgcagtttatgtatag
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