KEGG   Scophthalmus maximus (turbot): 118315324
Entry
118315324         CDS       T09850                                 
Symbol
tdg.2
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
  KO
K20813  thymine-DNA glycosylase [EC:3.2.2.29]
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:smau00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    118315324 (tdg.2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smau03400]
    118315324 (tdg.2)
Enzymes [BR:smau01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.29  thymine-DNA glycosylase
     118315324 (tdg.2)
DNA repair and recombination proteins [BR:smau03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     118315324 (tdg.2)
SSDB
Motif
Pfam: UDG AT_hook
Other DBs
NCBI-GeneID: 118315324
NCBI-ProteinID: XP_035498430
LinkDB
Position
7:1485750..1492177
AA seq 421 aa
MFIHSDQSTVEMEENQFTSLTVPTDYFQQWYQSSQQHPEVHHVMTYQNMGHHAEGLRDEP
VMTELSVHREPPLHQEPFHQNYPAAPNHYQEPAYPQNVREQQQHVAVQHHSQHQHAIQQQ
GPRVQQQPQPAGPPQAVTPVKKKRGRPPKQQAEDGEAQEDDEVEAAKKAKRILNRFNGMS
VAEVMAKTLPDVITFNLDILIIGINPGLLSAYKGHHYPNPGNHFWKCLFLSGLTDQQLNY
MHDESLPEKYNIGFTNMVERTTPGSKDLSSKEIREGGRQLLDKLKKYKPLIAAFNGKGIY
EIFCKETFGVKAKNLEFGLQPYKIPETETVCYLMPSSSPRCAQFPRAQDKVHFYIKLKDL
RDQMKGLLPSHEVLETEYSFNLQLAKEDAKRIAIKEEQVDPEYESCSGLRGDARQSSNVS
N
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgttcattcattcagaccagtccaccgttgagatggaggaaaaccagttcacgtccctg
acggtgcccacggattattttcagcagtggtaccagtcgagccagcagcatcccgaggtg
caccatgtgatgacgtatcaaaacatgggccaccacgcagaaggtctcagagacgagccg
gtcatgactgagctgtctgtccaccgggagccacctctacaccaggaaccttttcaccag
aactaccccgcagccccgaatcactaccaggagccggcgtacccgcagaacgtccgggag
cagcagcaacatgtcgcagtccagcatcactctcagcatcaacatgcaatacagcagcag
gggccgagagtccagcagcagcctcagcctgccgggccaccgcaagcggtgacgcccgtg
aagaaaaagcgaggccggcctccaaaacagcaggcggaggacggcgaggcgcaggaggac
gatgaggtcgaggctgccaagaaggcgaagaggatcctcaaccgcttcaacggcatgtca
gtggctgaggttatggccaaaaccctgccagacgttattaccttcaatcttgacattttg
ataattggaattaacccaggactattgtcagcctacaaaggacaccattacccaaaccca
gggaaccatttctggaaatgtctgttcctctccggtctaactgaccagcagctcaactac
atgcacgacgagagcctgccggagaaatacaacatcggcttcaccaacatggtggagagg
accacacctggcagcaaggacctctccagtaaggagattcgtgaaggaggtcgacaatta
cttgacaagctgaagaaatataagccgttaatagcagcttttaatggcaaaggtatttat
gaaatcttttgcaaagaaacctttggtgtgaaggcaaagaatctggagtttggtctgcag
ccctacaaaatcccagaaacggaaacggtgtgctacttgatgccctcatcaagccctcgc
tgtgcccagtttccccgagcacaggataaggtgcatttctacatcaagctgaaggatctg
agagaccagatgaaaggcttgctacctagtcacgaggtcctggagactgaatactccttc
aatcttcagctagctaaagaggatgctaagaggattgcaatcaaagaagagcaggtggat
ccggagtatgagagctgtagtgggctgcgtggcgacgcgaggcaaagcagcaacgtctcc
aactaa

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