Scophthalmus maximus (turbot): 118315672
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Entry
118315672 CDS
T09850
Symbol
tdg.1
Name
(RefSeq) thymine DNA glycosylase, tandem duplicate 1 isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
118315672 (tdg.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smau03400
]
118315672 (tdg.1)
Enzymes [BR:
smau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
118315672 (tdg.1)
DNA repair and recombination proteins [BR:
smau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
118315672 (tdg.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Ribosomal_L19e
Motif
Other DBs
NCBI-GeneID:
118315672
NCBI-ProteinID:
XP_035499027
UniProt:
A0A2U9BUC1
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Position
7:1493435..1499886
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AA seq
463 aa
AA seq
DB search
MEEKLNGSLPVVSPEYLQQWVQSAQQFHALQAQYSGLSPNHQFHYPEREAGETAMAHMTY
SDPMMDQEEPAHLAKPPAKKRGRPAQPKEPKAPKPPKVPKAPKAPKAPKAPKAPKPPKDP
NAPKAKPGPKPKKAAEAQGDGKQEKIDESFKKVKRKVDRFKGMSEEEVMKKTLPDLLDYN
LDYVIIGINPGLMAAFIGRWFPGPGNHFWKCLFLSGFTEELLNHMSDTTLPVKYKMGFTN
MVERATPGSKDLSSKELREGGKILVEKLKKFKPLIAVFNGKCIYEMFCREMFGKKPKKLD
FGLQPHKIPDCDVALYLMPSSSARCAQFPRAQDKVHFYIKLRELRDQLKGVQKSTEIEEV
DYSFDLSLAKEDAKRMAIKEEQYDPGYEDAYGGAYAERGPEGDQAPSQTNGHCTFSTAEN
TEGAQEATTSQTAEGQLPDGQWMTQCFADQIPDISGGPKDGSA
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaagctgaatggatcactgcctgttgtctccccggagtatcttcaacagtgg
gttcagtctgcccagcagttccacgctctgcaggcgcagtattcaggcctcagccccaac
caccagtttcactacccagagagggaggcgggagagacggccatggcacacatgacttat
tcagaccccatgatggatcaagaagaacctgctcacctggcaaaacccccagccaagaag
agaggcaggccagctcaacccaaggaacccaaggcacccaaacccccaaaagtacccaag
gcaccaaaggcacccaaggcaccaaaggcaccaaaggcaccaaagccgcctaaagacccg
aatgcgcctaaagcaaaacccggtcccaagcccaagaaggctgctgaggctcagggggac
ggcaagcaggagaagatcgatgagagcttcaagaaggtgaagcggaaagtcgaccgcttc
aagggaatgtcggaagaggaagtcatgaaaaaaactctaccagacctcctggactacaac
ctagactatgtcattattggtatcaacccagggctgatggcagctttcattggacgatgg
tttcctggacctggaaatcatttttggaagtgcctgtttctctctggatttactgaggag
ctgctcaaccacatgagtgacaccactctgccagtcaaatacaaaatgggtttcaccaac
atggtggagagggcgacaccaggaagtaaagacctctcaagtaaagaattacgcgaaggg
ggcaaaattcttgtcgagaagttgaagaaattcaagcctcttattgctgttttcaatgga
aaatgcatatatgaaatgttctgcagagagatgtttggcaaaaaaccaaagaagctcgac
tttggtttgcaaccgcacaagatcccagactgtgacgtggctctgtatctgatgccgtct
tccagcgctcgctgcgctcagttccctcgtgctcaggacaaagtccacttctacatcaaa
ctgcgggagctcagagatcagctgaagggcgtccagaagagcactgagatcgaggaggtc
gactactcgttcgacctgagtttggccaaagaggatgccaagaggatggcgattaaggag
gagcagtacgaccctggttacgaagatgcctacggtggagcgtatgcagagagaggaccc
gaaggggaccaggccccgagccagaccaacggtcactgtacattctcgactgcagaaaac
acagagggagctcaggaggcgaccacatcgcagacggcagaaggccagctgccagacgga
cagtggatgacccagtgctttgcagatcagatcccggacatcagtggtggaccgaaagac
ggcagcgcatga
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