Scophthalmus maximus (turbot): 118316572
Help
Entry
118316572 CDS
T09850
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain isoform X1
KO
K06752
MHC class II antigen
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04145
Phagosome
smau04514
Cell adhesion molecules
smau04672
Intestinal immune network for IgA production
smau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118316572
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118316572
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
118316572
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118316572
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smau04147
]
118316572
Exosome [BR:
smau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118316572
Exosomal proteins of epithelial cells
118316572
Exosomal proteins of breast milk
118316572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
Ig_3
Ig_2
I-set
MHC_II_alpha
Motif
Other DBs
NCBI-GeneID:
118316572
NCBI-ProteinID:
XP_035500418
LinkDB
All DBs
Position
1:complement(11951551..11954295)
Genome browser
AA seq
248 aa
AA seq
DB search
MPISCAGMRHSVVIILILTTRCTFSQAAHEYITVVGCFDNGPTEVTAVFNAEELMYADFE
RQVIEYTVPPFLMLDPGEVLKDIAVYKNAEKNKNLCLAIMAYCRAEEKNPPEEKDPPESI
IYPAEEVQRGVENLLICFVNHFYPPYIEVSWTKNGHPVSEGVSLSRYYSNDDLTFRQFST
MTFTPREGDIYSCTVEHSALETPTTRIWEPDFSHHSHGPDVFCGVGLAFGLIGVAAGTFL
FVKGHHRT
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgccgatctcctgcgcaggcatgaggcactctgttgttataatcctgatactcaccacc
cgctgcaccttttcacaagctgcccatgaatatatcactgttgtgggctgcttcgacaat
ggacctactgaggtgacggctgtatttaatgctgaagagttgatgtatgcagattttgaa
agacaggtcattgaatacactgtgcccccatttctcatgttggaccctggagaagtgttg
aaggacatagctgtatataaaaatgctgagaaaaacaagaatctgtgtttagcaattatg
gcatactgcagagcagaggagaaaaatccaccagaagagaaagacccccctgagagtatc
atctaccctgcagaagaagttcagcgcggagttgaaaacctgctcatatgctttgtgaat
catttctacccaccttacatcgaagtcagctggactaaaaatggtcacccggtgtcagag
ggggtgtcactcagtcgatattattccaatgacgatctgaccttccgccagttctccacc
atgacgttcacaccaagggagggggacatttacagttgcactgtggagcactcagccctg
gagacgcctacaacaagaatctgggaacctgattttagtcatcacagtcatggaccagat
gttttctgtggagttggtctggcgtttggcttaatcggggtggcagctggtacatttttg
tttgtcaaaggacaccataggacctaa
DBGET
integrated database retrieval system
