Scophthalmus maximus (turbot): 118316662
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Entry
118316662 CDS
T09850
Symbol
zgc:103759
Name
(RefSeq) U8 snoRNA-decapping enzyme
KO
K16855
U8 snoRNA-decapping enzyme [EC:
3.6.1.62
3.6.1.64
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau00230
Purine metabolism
smau01100
Metabolic pathways
smau01232
Nucleotide metabolism
smau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
118316662 (zgc:103759)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118316662 (zgc:103759)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118316662 (zgc:103759)
Enzymes [BR:
smau01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
118316662 (zgc:103759)
3.6.1.64 inosine diphosphate phosphatase
118316662 (zgc:103759)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
118316662 (zgc:103759)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nudt16-like
NUDIX
DUF5470
Motif
Other DBs
NCBI-GeneID:
118316662
NCBI-ProteinID:
XP_035500609
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All DBs
Position
3:complement(21382010..21388750)
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AA seq
226 aa
AA seq
DB search
MASGQLSRAEALACTACMHACHVMLYSDTKTQLFGKFPIRHIILMQMRFDGLLGFPGGLV
NPSKETLEAGLSRELLEELGVALPVSVEDHVGSCHAPDSSSSSSSSSSSSSSRLITHFYV
KKMEEEQIREVERAAASTATDHGHEVLGMVRVPLYTLRGGKGLGSFLSHAFIGNARSQLV
DSLLRLNLVAPEELHKALTSSLTTHTHSAGDLKSALALTVAKWKQL
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggacagctgtcgagggcggaggcgttggcgtgcacggcctgcatgcacgcc
tgccatgtgatgctctactctgacacgaaaactcagctgtttgggaaatttcccatcaga
catatcatactgatgcagatgcgctttgatggtctgttgggtttccccggcgggctagtc
aacccatcaaaggagacgctggaggcgggccttagcagggagctgttggaggagctgggc
gtggctcttcctgtgtccgtggaagaccatgtgggctcttgccatgcccctgattcatca
tcatcctcctcctcctcctcctcctcctcctcctctcgtcttatcactcacttctatgtg
aagaagatggaggaggagcaaattagggaggtggagagagcagctgcatccacagcaaca
gatcacggacatgaggttctgggaatggtcagagtcccgctctacaccctgagaggcggg
aaaggccttgggtctttcctgtcgcacgcattcatcggcaacgctcgctcccagctggtc
gactcgctgctgcgcctcaacctggtcgccccggaggagctgcacaaggccctcacgagc
tcactgacgacacacacacactcggcgggggacctgaaatcggccctggcgctgacggtg
gcgaagtggaaacagctttga
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