Scophthalmus maximus (turbot): 118316726
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Entry
118316726 CDS
T09850
Name
(RefSeq) zinc finger protein GLI2-like
KO
K16798
zinc finger protein GLI2
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
118316726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118316726
Transcription factors [BR:
smau03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
118316726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
Zap1_zf1
FOXP-CC
zf-C2H2_4
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
118316726
NCBI-ProteinID:
XP_035500729
LinkDB
All DBs
Position
1:31118232..31174130
Genome browser
AA seq
1513 aa
AA seq
DB search
MRPRSSSEVDFVPRVDLTFLRRRKFEWKSRGGAAEEPERSRRGAAEEPERSRRGAAEEPE
RSRSPDGARRDAGTGDRGRWTSAMETSAAEKKDKMDGSGFRDLPKKPSASETRAQHHVFP
TFHTPIPIDLRHHEGRYHYEPHALHAMHGHAGLAGSPVISDISLIRLSPAAVATGDSPFS
PPHPYVPPHMEHYLRSVHGSPTLSMISAARGLSPADLAHEHLKERGLFGLPPPPPGASPA
EYYHLMASHRSPYSELLMQGGGASAGAHLSDYITPIDVSRFSSPRLTPRLSRKRALSISP
LSDASIDLQTMIRTSPNSLVAYINNSRTSSAAGSSYGHLSVGGLSPSFPFPHPINPMAYQ
QLLSQQRGLSAFGHTPPLIQPPPAFSSRQPGLGLSSLPGCAHSDLKNHGGDSSVSSTVDH
MIPKRSKVKSEAEGLRPSSPCSPNHHGSSLDLKDEVDRDDCKQEPEAVYETNCHWEACSK
EYDTQEQLVHHINNDHIHGEKKEFVCRWDECSREQKPFKAQYMLVVHMRRHTGEKPHKCT
FEGCAKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVC
KIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRGDLPPRPPAPRENGENEKGPRERMQR
EDKISDNGSPRGMEDYLHLESIKTENSVMYQSSPGGHSSCSSEPSPLGSATNNDSGVEMA
AHSGGSLGDLSTLDELPFVESLGFEDSTGGVAAVGLHYRKQLGTIQLLEHLKKEKLKTVR
DSCRWASNTTPPVLGTKLPPIPASGSLLESPSMGGGLVSFPGSGLGNLSSGKSTLLENLS
ERRDSTSSTLSSVYTLSRRSSGISHCYSSRRSSQTSQYGANRPSNLSSADSYDPISADIS
RRSSQTSQCGGTNGGAGGWGLGSPLSLTPAQHYRLKVKYAAATGGAPPTPLPYMDQRCLK
THTALYGDPQESTTNRGLSSRQYSSHTTMSMMPHEIPSNNPRRASDPVRRLTIDSLSQPQ
MQRYNSMGTLTGGATMQPYPPPAQDHRHLSQQGCSDLHRYSYTLRPPSISENVSMETMTN
DIAEEDLMLPDFNTDNGDATCRVSANQQDFQGNPHPQQKSYHQRRTAVVNSNINLTTQVM
GPGQQGQKCSSSQRANVPVSLGLVDVGEHSSKAQVRGNLAVLQQNQNFGSFYNNLSSNQQ
MIQNIANTEQQRCKLLNAEPGANGLQHQRFQQSSNLNEAVRVQCRFNEGIGSYDKNGNTT
FPTCSNTAGVSGSLLSPTCKQEPVDMHFADAGFQPVQVKIEDCDGPIMISDQQNCNMISQ
NPLQTGNQSHLQPRPPTEPKSRNRRLSGPKYSSNSNPEVASKLSNNGVLGLHCNSDDNIM
YYTGHIQVFETNGNLDHHVPPVVNGPQFENDAASPGPADNQASRTVDCNAALEQAQIDFE
SMLDDGDQSSLMSGTLSPGLLQNLSRSSSRLTTPRNSVTLPSVPAGTGNMAIGDMSSLLT
ALAEENKFLNSMS
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccgcgttcttcctctgaagtggattttgtgccgcgcgtcgatttgacttttctc
agaagaagaaagtttgagtggaagtcgcgaggcggagccgcagaggagccggagaggagc
cggagaggagccgcagaggagccggagaggagccgcagaggagccgcagaggagccggag
aggagccggagtccggacggagctcggcgggacgcggggaccggggaccggggccgctgg
acgtcggccatggagacttcagccgccgagaaaaaggacaaaatggacgggagcgggttc
agagacctcccgaagaaaccctccgcgtcggagacgagagcccagcaccacgtgttcccc
accttccacacgcccatccccatcgacctgcgccaccacgaggggcggtaccactacgag
ccccacgcgctgcacgccatgcacggacatgcaggtttggccggcagccccgtcatctcc
gacatctccctgatccgcctgtcgcccgctgccgtggcgaccggcgactccccgttcagc
ccgcctcacccgtacgtgcccccccacatggagcactacctgcgctcggtgcacggcagc
cccacgctgtccatgatctccgccgccagaggactgagcccggccgacctggcccatgag
catttgaaagagcgggggctgttcggcctccctccccctccccccggggccagtccggcg
gagtactaccacctgatggcgagccaccgcagcccctacagcgagctgctgatgcagggg
ggcggggcctcggcgggggcccacctgtccgactacatcacgcccatcgacgtgtcccgg
ttctccagccccagactgacgccgcggctcagcaggaaacgagctctgtccatctcgccg
ctgtccgacgcctccatcgacctgcagacgatgatccgcacgtcgcccaactcgctggtg
gcctacatcaacaactcgcgcaccagctcggccgccggcagctcgtacggacacctgtcg
gtcggaggcctcagcccgtccttcccgttccctcatcccatcaaccccatggcgtaccag
cagctcctgtcccagcagcgcggcctcagcgccttcggccacaccccgcccctcatccag
cctccgcccgccttctccagccgccagccgggcctcgggctctcctcgctgccgggctgc
gcccacagcgacctgaagaaccacggcggcgactcgtccgtcagcagcacagtcgaccac
atgatccccaagaggtcaaaggtcaagagtgaagccgagggactgaggccttcgtctccg
tgttcaccgaaccaccacggcagctcgttggacctgaaggacgaggtggaccgcgacgac
tgcaaacaggagcccgaggccgtttacgaaaccaactgccactgggaggcctgcagcaaa
gagtacgacacgcaggagcagctggtgcatcacatcaataacgaccacatccacggagag
aagaaggagttcgtgtgccgctgggacgagtgttcgcgggagcagaagcccttcaaagct
cagtacatgctggtggttcacatgcgccgacacacgggggagaaaccacacaagtgcacg
ttcgagggctgcgccaaggcctactcccgcctggagaatcttaaaacacatctgcgctcg
cacaccggtgagaaaccgtacgtttgcgagcacgagggatgcaacaaagctttctccaac
gcctcggaccgagccaagcaccagaaccggacgcactccaacgagaaaccctacgtgtgc
aagatccccggctgcaccaagcgatacacggaccccagctcgctcaggaagcacgtgaag
acggtgcacggccccgaggcccacgtcaccaagaagcagcgcggcgacctgccgccccgg
ccgccggcgccaagggagaacggcgagaacgagaaggggcccagagagaggatgcagagg
gaggacaagatatcggacaacggctcccccagaggcatggaggactacctgcacctcgaa
tccatcaagacggaaaactctgtgatgtatcagtccagccctggcggtcactcatcatgt
agcagcgaaccatcaccacttggcagtgccaccaacaatgacagtggagtagaaatggcg
gcgcacagcgggggaagcctgggggacctcagcaccctggacgagctgcccttcgtggag
tccttgggctttgaagattccacgggcggtgtcgcggcggtgggtctccactatcgaaag
cagctcggcaccattcagctcctggagcatctgaagaaagagaagctgaagacagtgagg
gactcgtgtcgatgggccagcaacacaacccccccggtcctcggcaccaagctcccaccc
ataccagccagcgggtccctcctggagagtccaagtatgggtggaggtctggtgtccttc
cctggttcaggcttgggtaatctgagctctggtaaatcaactctgctggaaaacctttca
gagcgccgtgacagcacctccagcaccctgagctcagtttacaccctcagccgccgctcc
tccggcatctcccactgctactctagtcggcgttccagccagacctcacagtacggtgcc
aaccgccccagcaatctcagctcagctgactcttatgaccccatctctgccgacatctca
cgacgctccagtcagaccagtcaatgtggaggaaccaacggtggagcaggaggatggggt
ctaggcagccccctcagcctgacaccagcccagcactaccgcctcaaggtgaaatatgcg
gctgccactgggggtgcaccacctacaccgcttccatatatggaccaaaggtgtttgaag
acccacacagccctttacggtgacccccaggaatccaccaccaacagaggcctgtcttcc
aggcagtacagcagccataccacaatgagcatgatgccccacgagatcccatccaacaac
ccccgcagagccagtgaccctgtcagacggctgaccatagattctcttagccagccacaa
atgcagcgctacaacagcatgggaacactgactggaggggcgaccatgcagccctatccc
cctcctgcacaagatcaccgtcatttgtcccagcagggctgctcagatctccaccgatac
tcttacaccctacgaccgccaagcatttctgagaatgtcagcatggagacgatgactaat
gacatcgcagaggaagacctgatgctgcctgacttcaacaccgacaatggagatgcaacc
tgcagagtatcggccaatcaacaagatttccaaggaaacccccatccccagcagaagtcg
taccatcagagaaggacagctgtcgtgaattccaacattaacctgaccactcaggtcatg
ggtccagggcagcaaggacagaagtgttcgtcgtcacaaagggccaacgtccccgtctct
ttaggactcgtggatgtcggcgagcacagctccaaagcacaggtccgagggaacctggct
gtgctccagcaaaaccagaactttggatccttttacaacaatcttagctccaaccagcag
atgattcaaaacatcgccaacacagaacagcagagatgcaaactgctgaatgctgagcca
ggagcaaatggcctgcagcatcagaggttccagcagtcgtccaatctcaacgaagcagtt
cgtgtccagtgtcggttcaacgaagggatcggttcctatgataagaatggtaacaccacc
tttccgacctgtagcaacacagcaggagtgagcgggagcctgctgagccccacctgcaaa
caggagccggtcgacatgcactttgctgatgctggatttcagcctgtgcaagttaaaatt
gaggactgtgacggacccataatgatttcagatcagcaaaattgcaatatgatctcccag
aatcccttgcaaactgggaatcagagccatctccagccaaggccaccgacagaacccaaa
tctcgaaacaggcgcctttcagggccaaagtactcgagtaattctaacccagaagttgct
tccaaattatccaacaacggagttttagggcttcattgcaactctgatgacaatatcatg
tactacacaggacacattcaagtatttgagacgaacgggaacttggaccatcacgttcct
cctgtggtgaacgggcctcagtttgaaaatgatgcggcttctcccggtccagctgacaac
caggcgtccaggaccgtagactgtaacgcagccctggaacaggcacagatagactttgag
agcatgctcgacgacggggatcagtccagcctgatgtcgggaaccctgagtccgggtctg
ctccagaatttgtcccgtagttcctctcgcctgacgacgccgaggaactcagtcacgttg
ccctcggtgccggcaggcacaggaaacatggccatcggcgacatgagttcattgctgact
gctcttgcagaggagaacaagttcctcaactccatgtcttag
DBGET
integrated database retrieval system
